| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5368 |
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| Symbol | |
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| ID | 5195704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 274228 |
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| End bp | 275559 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579295 |
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| Product | TraB pilus assembly family protein |
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| Protein accession | YP_001260243 |
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| Protein GI | 148550804 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.181212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG CGGACATTTT CTCGCGCACC CGTCGCACCC TGGACGGTCC CGACGAAGAA
ACCGAGAATG TTTCACCGGT AACCGGCGAA ATCGGCAGCA ACGAGGCGAC GCGCAAGAAG
CAGCGGTTGC TGCTCGCGGG CGTTGCCGGC GCGGGGCTGG TGCTCTCCTC CTTCTGGATA
TTCGGGGGCA ACGACAAGGA CGCGGCTGAA GACGACGACG GTGAAAAGGT CGAGGTGTCG
ACCAAGGATC TGGTGAACCG CAACCTCTCC CAACAGGAGT GGATGGGGAT GTCCGAGAAC
CAGTTCCAGT CGATGGAAAA CCAGCTGAAG TCGGTGAATG CGCAGCAGAA CCGCGTCGAC
GCGCTGGCAG CCCAGGTCGA AGCGCTGAAA GGACAGAACC AGGCCCTTCA GGCTGATGGC
CAGCGGGTCT TCTCCGCCTA CCAGGCCGAG AACGAACGGC TCAAGCGTGA GGCGGCGCAG
CAGCGGGCGG CACCGCCGCC CCAGCCAGGT CCAGCCGCGC TCTACGGCCC GGGCGGGACC
CAGGCCTATC GGCGGCCCGA TGGCACGCCG GGGGCAGCCG GGCCCGCCGG CGCGCCGATG
GGCGGAGCGG AAGTCAAGAT GGTGAACTTC CAGACCGCCG AGACCGGCAA TGCCTCGCGC
GTCGCCAAGG GCAACACGGT CTACACCGAC AGCGTCAACT ACCTGCCGCC CAACAGCTTC
GCGTCCGCCA AGGTGATCGT CGGCGTCGAT GCCAGTGCCG GCGTCAACAG CCAGTCCGAT
CCGCTTCCGG TCGTGCTGCG CGTGACGGGC CCTGCGCGCA GCGTCTTCCA GAACGGGCGC
CTGCTCACCA CCAAGATCGA GGGCTGCCTC ATCAACGGGG CGGCGCGCGG CGACCTTTCG
GCCGAGAAGG TCTACGTCAA ACTGCAGAAG ATGACCTGTC CGCAGCCCGG CGGCCGCTAT
GCGGTCTCGG AGGTCAAGGG CTTCATCGCC TTCGGCGGCA AGACCGGGGT GCGCGGCCGG
GTGGTCTCGC GCGAAGGCGG GCTGGTGACG CAGGCCTTCA TTGCCGGCCT CTTCGGTGGC
TTTGGCCGCG GTTTCTCCGC AAATGCCAAT TCGGTGTTCC AGGGCACCAA CATAACCACA
AACGGCAAGC GCGAAAAACT CTCGGCGGGC GAGATCCTGG AGGGTGGCTT CGGGGAAGGC
GTCGCCCAGA CCGGCGACAT GGTCTCGAAA TATCTGATCG AGCGCGCCGA ACAGTATCAG
CCGGTGATCG AGATGCCGAC CGGCATCGAT GTCGAAATCG TCTTCTTGGA GGGTGTCTAT
GTCCGTAACT GA
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| Protein sequence | MALADIFSRT RRTLDGPDEE TENVSPVTGE IGSNEATRKK QRLLLAGVAG AGLVLSSFWI
FGGNDKDAAE DDDGEKVEVS TKDLVNRNLS QQEWMGMSEN QFQSMENQLK SVNAQQNRVD
ALAAQVEALK GQNQALQADG QRVFSAYQAE NERLKREAAQ QRAAPPPQPG PAALYGPGGT
QAYRRPDGTP GAAGPAGAPM GGAEVKMVNF QTAETGNASR VAKGNTVYTD SVNYLPPNSF
ASAKVIVGVD ASAGVNSQSD PLPVVLRVTG PARSVFQNGR LLTTKIEGCL INGAARGDLS
AEKVYVKLQK MTCPQPGGRY AVSEVKGFIA FGGKTGVRGR VVSREGGLVT QAFIAGLFGG
FGRGFSANAN SVFQGTNITT NGKREKLSAG EILEGGFGEG VAQTGDMVSK YLIERAEQYQ
PVIEMPTGID VEIVFLEGVY VRN
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