Gene Swit_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5351 
Symbol 
ID5195772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp257895 
End bp259787 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content64% 
IMG OID640579278 
Productheat shock protein 90 
Protein accessionYP_001260226 
Protein GI148550787 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.514382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA TTACCGACGC TTCCCCCGAC ACGCGGTCCT TTGAAGCCGA TGTCGCCAAG 
CTGCTGCACC TCATGGTGCA CTCCGTTTAT TCGGACAAGG ATGTCTTCCT TCGCGAACTG
GTGTCCAATG CCGCCGACGC CTGCGAAAAG CTGCGCTACG AAGCGATAGC GGCGCCGGCA
CTGCTGGGTG ACGACCCTCA GCCGCGGATC ACGATCACGC TCGATCCCGA TGCGCGCCAG
TTGACCATCG AGGATAATGG CATCGGCATG ACCCAGGCCG AAATGGCCGA GGCGCTCGGC
ACGATCGCCC GCTCAGGCAC CAAAGCCTTC ATGGAACAGA TCGCCGCCAA GAAGGATGGC
GAGGGCGGCC AGCTCATCGG CCAGTTTGGC GTCGGCTTCT ATTCCGCCTT CATGGTCGCA
GACAAGGTCG ACGTGTTGTC GCGCCGCGCT GGCGAGGAGG GGGCTGGCCT GTGGACGTCT
GATGGGCTCG GAACCTACGC GATCGGGGAT GCTGATCCGG CCGAGGCCCC GGCGCGCGGA
ACGCGCGTCA TTCTTCATCT CAAGGAAGAC GCGGCGGACT ATACCCGGCG CTTCAGCGTG
GAGCCCAAGA TCAAGGCTCA GTCGGGCCAT GTCCCAGTGC CGATCGTCCT CAAGGACAAA
CCCGATGCGG AGCCGGCGCA GATTGCCGAT GGCGCGGCGC TGTGGACGCG GTCCAAGTCC
GAAATCAGCG AGGAAGACTA TACCGACTTC TATAGGACCA ACGCCGGACA GTTCGACACG
CCGGCACTGA CGCTGCACTA TCGCGCCGAG GGCGTGCACG AATATAATGT GCTCGCTTTT
GTGCCTGAGA TGCGGCCCTT CGACCTGTTC GACCCCGATC GGGCCGGGCG GATGAAGCTC
TATGTTCGCC GGGTGTTCAT CACGGGCGAG GCGCAGATCC TGCCCCGCTA CCTGCGCTTT
GTGCGCGGAC TGGTCGACTC GCAGGACCTG CCGCTCAACG TCTCGCGCGA GATGATCCAG
GAGAGCCCGG TTCTGGCCGC GATCCAGAAG GGGGTTTCGA ACCGCGTGTT GAGCGAACTG
GAAAAGCTCG CGAACAGCGA TGGCGACAAG TATCTCAAGA TCTGGGAGAA TTTTGGGTCG
GTCCTGAAGG AGGGTCTCTA CGAGGACTAT GCCCGGCGCG AGACGCTGCT GGGGCTCGCC
CGCTTCAAGA CCAGCACGTC GAACAATGAA TGGCGGTCGC TCAAGGACTA TGCTGCCGAT
CTGAAAGAGA ACCAGACCGC GATCTATTAT GCGGTGGGTT CCGACATCGA GCGGCTCGCC
TCCTCGCCGC AGCTCGAAGG CTTCCGCGCG CGCGGCATCG AGGTGCTCCT GCTGACCGAC
CAGATCGACG GTTTCTGGGT GACCGGAGCG CCGGATTTCG AAGGCAAGCC GTTCAAGTCG
GTGACACAGG GCATGTCGGA TCTGGGTCTC ATCCCCCTCG CCGATGGCGA GCAACCGCCG
GCGGAAACGT CGGACGAGGT CGCCGGCTTC ATCGACTTCG TCAAGGCGAC GCTGGGCGAT
GTGGTGTCCG ATGTCCGCGC GTCGGAACGG CTGACCGACA GCCCGGTCTG CCTGGTCGCG
CCCGAACACG GCATGGACCG CCAGATGGAG CGGCTCCTGG CGGGCGCGGG GCAGCTTGCG
CAGGTGAGCA AGCCGGTCCT CGAGATCAAT CCCCGGCACG CGCTCGTTAC CCGGCTCAGC
GCGGTAGGCG CAGAGCAGGC GGATCTGCGC GAGGATGCAG CGCATCTGCT GTTCGACGAG
GCCCGCATCG CCGACGGGGA ACTGCCGCTC GATCCGCGCG CCTTTTCTGA ACGGCTTGGC
CGGGTCCTGC TCCGCGGCAG CGGCCCGATC TGA
 
Protein sequence
MSTITDASPD TRSFEADVAK LLHLMVHSVY SDKDVFLREL VSNAADACEK LRYEAIAAPA 
LLGDDPQPRI TITLDPDARQ LTIEDNGIGM TQAEMAEALG TIARSGTKAF MEQIAAKKDG
EGGQLIGQFG VGFYSAFMVA DKVDVLSRRA GEEGAGLWTS DGLGTYAIGD ADPAEAPARG
TRVILHLKED AADYTRRFSV EPKIKAQSGH VPVPIVLKDK PDAEPAQIAD GAALWTRSKS
EISEEDYTDF YRTNAGQFDT PALTLHYRAE GVHEYNVLAF VPEMRPFDLF DPDRAGRMKL
YVRRVFITGE AQILPRYLRF VRGLVDSQDL PLNVSREMIQ ESPVLAAIQK GVSNRVLSEL
EKLANSDGDK YLKIWENFGS VLKEGLYEDY ARRETLLGLA RFKTSTSNNE WRSLKDYAAD
LKENQTAIYY AVGSDIERLA SSPQLEGFRA RGIEVLLLTD QIDGFWVTGA PDFEGKPFKS
VTQGMSDLGL IPLADGEQPP AETSDEVAGF IDFVKATLGD VVSDVRASER LTDSPVCLVA
PEHGMDRQME RLLAGAGQLA QVSKPVLEIN PRHALVTRLS AVGAEQADLR EDAAHLLFDE
ARIADGELPL DPRAFSERLG RVLLRGSGPI