Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5348 |
Symbol | |
ID | 5195780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | + |
Start bp | 255882 |
End bp | 256436 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640579275 |
Product | hypothetical protein |
Protein accession | YP_001260223 |
Protein GI | 148550784 |
COG category | [S] Function unknown |
COG ID | [COG3652] Predicted outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.956984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACCGC TTCTTTTGGT ATCTCTTTCG GCCGCCGCGC TCTGCGTTTC CGCTTGCGGC AAGAAAGCCG AGCCTGTCGA GAATACGGCA GCGACCTCCG CGGCCGAACC TGCCGCGCTG GCACCTGCGG TCCTGAGCCC GGGACAGGCC TTTGCAAACA CGGCGGCAGC AAGCGACGCT TTCGAGATCG AGACGTCGAA GCTCGCGGCG AGCAAGGCGC AGTCTGCAAA AATCAAGTCC TTCGCCGAGC AGATGATCAA GGCCCACACG GACTCGACCG CGAAGCTCAA AACGGCGGCC GCGGCCGCGA CGCCGGCGAT CGCGCCTGAT GCGGCGTTGA CCCCGGCCCA GCAGCAGGAG CTTGCCGATC TGCAAACCAA GTCGGGCGCC GAGTTTGATC GTGCCTATGC GCGCCTCCAG GCCGATGGCC ACCAGAAGAC ATTGGATGCG CTCAAGGCCT ATGCGGCAAG CGGCGACGTT GCGCCCCTCA AGGCTTTCGC ATCCGAGCTC GTGCCGATCG TTACTGCGCA CCTCAATATG GCCAAGGGCC TCTAA
|
Protein sequence | MKPLLLVSLS AAALCVSACG KKAEPVENTA ATSAAEPAAL APAVLSPGQA FANTAAASDA FEIETSKLAA SKAQSAKIKS FAEQMIKAHT DSTAKLKTAA AAATPAIAPD AALTPAQQQE LADLQTKSGA EFDRAYARLQ ADGHQKTLDA LKAYAASGDV APLKAFASEL VPIVTAHLNM AKGL
|
| |