Gene Swit_5346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5346 
Symbol 
ID5195785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp254810 
End bp255166 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content63% 
IMG OID640579273 
Productresponse regulator receiver protein 
Protein accessionYP_001260221 
Protein GI148550782 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACA CACGCAACAT TCTTGTCGTT GAGGACGAAC CGCTCATCGC CATGATGCTC 
GAGGATTTCA TCGACATGAT GGGTCATCGG ATCGGCGCGG CCGTAGGAAG CGTCGCCGAC
GCGCTCGCCG AGATCGAAGC GCAGAGCTTT GACCTCGCCA TCCTCGACCT CAACCTGGGC
AAGGAAACCT CCTGGCCGGT CGCCGACGCG CTTCAGGATC GCGGCATCCC GTTCGTCCTT
GCCACGGGTG GCAACCTCCA GGCGCCGTCC GAGCGCCATG CCGGCGCCCG GACCCTGACC
AAGCCCTATA CTTACGAGAA CGTACAGGCT TCCATCGACG CGCTCGCGGG CGTGTGA
 
Protein sequence
MTNTRNILVV EDEPLIAMML EDFIDMMGHR IGAAVGSVAD ALAEIEAQSF DLAILDLNLG 
KETSWPVADA LQDRGIPFVL ATGGNLQAPS ERHAGARTLT KPYTYENVQA SIDALAGV