Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5345 |
Symbol | |
ID | 5195765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | + |
Start bp | 253592 |
End bp | 254791 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640579272 |
Product | alcohol dehydrogenase |
Protein accession | YP_001260220 |
Protein GI | 148550781 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.501465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCGA TCACCTGGCA CGGCAAGCAC GACGTACGCT GCGACACGGT CGACGATCCC GCGATCGTCA ATCCGCGCGA TGCGATCATC CGCGTGACCT CCACCGCGAT CTGCGGGTCG GACCTGCATC TTTATGACGG CTATATCCCG ACGATGCAGA AGGGCGACAT TCTCGGCCAC GAGTTCATGG GCGAAGTGGT CGAGGCCGGG CCCAAGAGCA GCCTCAACAC CGGACAGCGC GTCGTCGTGC CGTTCACCAT CTCGTGCGGC AGCTGCTACC ACTGTTCGAA GACGCAATAT TCAGCCTGCG AGAATGCGAA CCCGGCCGAC AACCAGGATA TCGGGCGCGA GGGCTATGGC CATCCGATGC CCGGCCTGTT CGGCTACAGC CACATGACCG GAGGCTATGC CGGCGGGCAG GCCGAATATG TCCGCGTGCC CTTCTCTGAT GTCGGCCCGC TCGTTATTCC TGACGAGAGC ATCCCGGACG ACAAGGTGCT GTTCCTCTCG GACATCCTTC CTACGGGCTG GATGGCGGCG GAGAATGCCG AGATCGAGCC GGGCGACACA GTGGCGGTCT GGGGCTGCGG TCCGGTCGGC CTGTTCGCGG TGCAGTCGGC TTTCCTGATG GGCGCCGAGC GGGTTATCGC GATCGATCAT TTCCCGCACC GCCTCGAACT TGCGCGCAAA TTCGGTGCCG AGACTGTCAA TTTCGAAGAG AGCAAAGTTT ACGAGGCGCT GATGGAGATG ACGGGCGGGA TCGGCCCCGA CGCGGCTATC GATTGCGTGG GTCTTGAGGC GCACGGCGCC TTTGCCGACA ATATCATCGA CCAAATCAAG GCTTCTACCT TCCTTGGGAC CGATCGCATC CACGCCATCC GGCAGGTGAT CCTGGCGACC CGCAAGGGCG GGCGTGTCTC GATGCCCGCC GTCTATGGCG GCTTCGTCGA CAAGTTCCCC TTGGGCGCGC TGATGGAGAA GGGCCTGACC CTCAAGACCG GCCAGACGCA TGTGCAGCGC TATCTGCAGC CTCTCTATGC CGCGATCGCG GAGGACAAGA TCGATTCAAC CTTCCTTATC AGCCACCGCA TGGCGCTCGA GGATGGGCCA CTCGGCTATC AGAAATTCCA CGACGAGCAG GACAGCTACA CGAAGATCGT TTTGAAGCCA GGGCAGGCAG CGGGCGCAAC GGCTGCCTGA
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Protein sequence | MKAITWHGKH DVRCDTVDDP AIVNPRDAII RVTSTAICGS DLHLYDGYIP TMQKGDILGH EFMGEVVEAG PKSSLNTGQR VVVPFTISCG SCYHCSKTQY SACENANPAD NQDIGREGYG HPMPGLFGYS HMTGGYAGGQ AEYVRVPFSD VGPLVIPDES IPDDKVLFLS DILPTGWMAA ENAEIEPGDT VAVWGCGPVG LFAVQSAFLM GAERVIAIDH FPHRLELARK FGAETVNFEE SKVYEALMEM TGGIGPDAAI DCVGLEAHGA FADNIIDQIK ASTFLGTDRI HAIRQVILAT RKGGRVSMPA VYGGFVDKFP LGALMEKGLT LKTGQTHVQR YLQPLYAAIA EDKIDSTFLI SHRMALEDGP LGYQKFHDEQ DSYTKIVLKP GQAAGATAA
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