Gene Swit_5337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5337 
Symbol 
ID5195622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp243349 
End bp243762 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content63% 
IMG OID640579264 
ProductGreA/GreB family elongation factor 
Protein accessionYP_001260212 
Protein GI148550773 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.641295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA CCAAAGCGGC CCGCCGGCCG CCCATCCATA TGATCGACAG CGAAGCCGAT 
ATCCTGGCCG ATCTCGCCAC CAGCGCCGCC ACCCGCCTGC CTCAGGTCAG CCAGTTGCTG
CTGGAAGAAC TGGGACGCGC CACCATCCAC AAGGCTGATC GAATTCCCGG CGATATTGTC
ACGATGCACA GCGTCGTCCA GTTCACGGAC GCAGCGAGTG GCAAGGAACA TCGCTACCAG
TTGGTCTATC CCAAGGACGC CGACATCGCC GAAGGACGTA TATCCATCCT TACCCCGGTC
GGTGCCGGGC TCATCGGCCT GCGCGCCGGA CAGTCGATCC TCTGGCCCGA CCGGGATGGT
CATGAACGCC TGCTCACTAT CGCGAAGGTA AGCCGGGAAT CCCTGGCCGC CTGA
 
Protein sequence
MTKTKAARRP PIHMIDSEAD ILADLATSAA TRLPQVSQLL LEELGRATIH KADRIPGDIV 
TMHSVVQFTD AASGKEHRYQ LVYPKDADIA EGRISILTPV GAGLIGLRAG QSILWPDRDG
HERLLTIAKV SRESLAA