Gene Swit_5330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5330 
Symbol 
ID5195752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp231485 
End bp232291 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content58% 
IMG OID640579257 
Producthypothetical protein 
Protein accessionYP_001260205 
Protein GI148550766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.078924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCTTCA GCTATACGCT CTTTCTCGTC CTACTGCTGA TATTCCCGGG TCTATGTTTC 
TGGGCCGGCT GGCGCTTCGG GGAGCGAACC GACTTCCTCA GTCCCTCGCC TGACGTTCCA
AACTCAACAC TGACCCTGTT CATCGTCGTC ATCGGCACGC TTCTGGGTCA TCTTCTAGGC
ACCACTGCTT ATACTTTGCA GAGCCTGTGG TGCCGAACCG GGCTGTGCCT CTCCATCTCC
TTCGATCCCA ACATCTATCG CGCTCTGGTG AAAGGCGTTG AAGGTGCAGG GACAGCGCCC
GATGCCGCTT TCGAAATATG GCTTTTCTCG ATGTTGATGG TCGGAATCGG CACGGGCTCA
CTGGCCTACT GGCTGTCGCG GCAAAAATGG GTGACCGATC GGCTCGATCC CGTCGCGTTT
GGATGGCTGG CTCCGGCCGT CCAGGCAGTC AAACGAGGTG ATTCCTTCGT CGTCGCCTAT
GTGTTGACCG GAACGAGCCA CGAAGGCTCT TCCATTGCCT ATGAGGGGAC AGTTCAGCAA
CTCGCCCTTG ATGGCGACCA ATCGATAAAG CTGATCGTCC TCAACGATGT GGATAGATTC
CTGGTCAAGA TCACCGACAA CGGACTCCAA CGTCTAGAAT CCGAAGCTAC GCCGATCGTT
CAGCTGCAGA TCGCCGGCGA CGAGATCGTC AATGTAGCGC TGGAGATCGT TCGTGCGCCC
GAGCAGGACG TAGCTGCCGT CGAGGAAGCA GGCGAGGAAG CGCACGATCC CGCGCCGTCG
CGGAATCCGG AACGGACACC GCGCTGA
 
Protein sequence
MAFSYTLFLV LLLIFPGLCF WAGWRFGERT DFLSPSPDVP NSTLTLFIVV IGTLLGHLLG 
TTAYTLQSLW CRTGLCLSIS FDPNIYRALV KGVEGAGTAP DAAFEIWLFS MLMVGIGTGS
LAYWLSRQKW VTDRLDPVAF GWLAPAVQAV KRGDSFVVAY VLTGTSHEGS SIAYEGTVQQ
LALDGDQSIK LIVLNDVDRF LVKITDNGLQ RLESEATPIV QLQIAGDEIV NVALEIVRAP
EQDVAAVEEA GEEAHDPAPS RNPERTPR