Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5330 |
Symbol | |
ID | 5195752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 231485 |
End bp | 232291 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640579257 |
Product | hypothetical protein |
Protein accession | YP_001260205 |
Protein GI | 148550766 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.078924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCCTTCA GCTATACGCT CTTTCTCGTC CTACTGCTGA TATTCCCGGG TCTATGTTTC TGGGCCGGCT GGCGCTTCGG GGAGCGAACC GACTTCCTCA GTCCCTCGCC TGACGTTCCA AACTCAACAC TGACCCTGTT CATCGTCGTC ATCGGCACGC TTCTGGGTCA TCTTCTAGGC ACCACTGCTT ATACTTTGCA GAGCCTGTGG TGCCGAACCG GGCTGTGCCT CTCCATCTCC TTCGATCCCA ACATCTATCG CGCTCTGGTG AAAGGCGTTG AAGGTGCAGG GACAGCGCCC GATGCCGCTT TCGAAATATG GCTTTTCTCG ATGTTGATGG TCGGAATCGG CACGGGCTCA CTGGCCTACT GGCTGTCGCG GCAAAAATGG GTGACCGATC GGCTCGATCC CGTCGCGTTT GGATGGCTGG CTCCGGCCGT CCAGGCAGTC AAACGAGGTG ATTCCTTCGT CGTCGCCTAT GTGTTGACCG GAACGAGCCA CGAAGGCTCT TCCATTGCCT ATGAGGGGAC AGTTCAGCAA CTCGCCCTTG ATGGCGACCA ATCGATAAAG CTGATCGTCC TCAACGATGT GGATAGATTC CTGGTCAAGA TCACCGACAA CGGACTCCAA CGTCTAGAAT CCGAAGCTAC GCCGATCGTT CAGCTGCAGA TCGCCGGCGA CGAGATCGTC AATGTAGCGC TGGAGATCGT TCGTGCGCCC GAGCAGGACG TAGCTGCCGT CGAGGAAGCA GGCGAGGAAG CGCACGATCC CGCGCCGTCG CGGAATCCGG AACGGACACC GCGCTGA
|
Protein sequence | MAFSYTLFLV LLLIFPGLCF WAGWRFGERT DFLSPSPDVP NSTLTLFIVV IGTLLGHLLG TTAYTLQSLW CRTGLCLSIS FDPNIYRALV KGVEGAGTAP DAAFEIWLFS MLMVGIGTGS LAYWLSRQKW VTDRLDPVAF GWLAPAVQAV KRGDSFVVAY VLTGTSHEGS SIAYEGTVQQ LALDGDQSIK LIVLNDVDRF LVKITDNGLQ RLESEATPIV QLQIAGDEIV NVALEIVRAP EQDVAAVEEA GEEAHDPAPS RNPERTPR
|
| |