Gene Swit_5313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5313 
Symbol 
ID5195825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp210139 
End bp210645 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content63% 
IMG OID640579240 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001260188 
Protein GI148550749 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.919817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.26709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA TTTCCAAACC CGCGGCCCCT GGCGACGTCG AACCTCTCGA TATCAGCCTC 
ACCATCAACG GCGAACGGCA GGCGTTCGCG GTCCTGCCCT GGGTAACGCT GCTCGATCTG
CTGCGCGACC ATGCCGATTT CACTGGCACG AAGAAGGGCT GCGATCATGG CCAGTGCGGC
GCCTGCACGG TGCTGGTCGG CGACCGCCGG ATCAACAGCT GCCTGCGTCT TGCGGTGATG
CATGATGGCG ATAACGTCAC GACGATCGAG GGGATGGGCG ATGGGGACGC GCTGCATCCG
CTGCAACAGG CGTTTTTGGA CCATGACGCC TTCCAGTGCG GCTATTGCAC GCCGGGCCAG
ATCTGCTCGG CCCAGGGGCT GATCAACGAA GGCCGCGCCC GAAGCCGGGA GGAGATACGC
GAGCTCATGA GCGGCAATCT TTGTCGTTGC GGCGCGTATA CGAACATCGC CGACGCTATC
GAGCAGGTCT TGGGAGAGCG AGCATGA
 
Protein sequence
MATISKPAAP GDVEPLDISL TINGERQAFA VLPWVTLLDL LRDHADFTGT KKGCDHGQCG 
ACTVLVGDRR INSCLRLAVM HDGDNVTTIE GMGDGDALHP LQQAFLDHDA FQCGYCTPGQ
ICSAQGLINE GRARSREEIR ELMSGNLCRC GAYTNIADAI EQVLGERA