| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5285 |
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| Symbol | |
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| ID | 5195584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 184563 |
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| End bp | 185678 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579212 |
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| Product | putative DNA topoisomerase I |
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| Protein accession | YP_001260160 |
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| Protein GI | 148550721 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.313661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.942542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC AAGAGGACGC GCCGGCCGAC ACCGGCGAGG CAGGAACGAT CGTCGATGCG
CAGGAAGCCG CGGAAAATGC GGGTCTCGTC TACGTAACCG ACGACAGCCC GGGAATCGTC
CGCCAGCCCT ACCGTGGCAA GTTTCGCTAT CGCGATGCCC GGGGCAACGT CGTGACGGAC
GAAAAAACCC TGAAGCGGAT CGCTTCGCTC GCCATCCCCC CGGCCTATAC CGATGTCTGG
ATCTGCCCCA AAGCAAACGG GCACATCCAG GCGACCGGCC GTGACGCAAA GGGCCGCAAG
CAGTATCGTT ACCATCCGCG TTTCCGCGAG GTGCGCGACA GCACCAAGTA CGAGCACATG
CTGGACTTCG CAAAGGCCCT TCCTGGCGTG CGCGAACGCA TCGATGCCGA TCTCAAGAAG
CGCGGGCTAC CGCGCGAGAA GGTCCTGGCC GCCGTCGTGC ATCTTCTCGA GACAACGATG
ATCCGCATCG GCAACGCGGA TTATGCCAAG CAAAACAAGA GTTATGGGCT CACGACCCTC
CAGGACCGCC ATGTCGCGAT TGACGGCGCT GAGCTCCGAT TCAATTTCAA GGGCAAGAGC
GGAAAGCAGT GGCGGCTGAA GCTGAAGGAT CGGCGCATCG CGAAGATCGT CAAGGCCAGC
CAGGATCTGC CCGGACAGCA TCTGTTCCAA TATGTGGGCG AAGACGGCGC GCAGTACGAA
GTCACCTCGA ACGATATCAA CGCTTATCTT CGGGAGATTT CCGGGACGGA CATCACCGCC
AAGGATTTCC GCACCTGGAA TGGCACGGTG CTCGCCGCTC TGGCGCTGTC CGAATATGAA
AAGGTCGACA GCCAGGCTGC GGCGAAACGA AATGTCCGGA CCGCAATCGA AGCCGTCGCT
TCGCGGCTTG GCAACACGCC CACTGTGTGC CGCAAGTGCT ACATTCATCC CGAAGTTTTC
GAGAGCTACC TGAGCGACGA ATTGGTCCTG GAAGCGCGGG ACGCCGTCGA GAAGGAGCTT
CGGGAAGACT TGTCCCGCCT CCGTCCGGAA GAAGCGGTCG TGCTGGCCTT CCTACAGCGC
CGGCTCGCCG AAAAGGCAAA GATCCCGGCG TTGTAG
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| Protein sequence | MKTQEDAPAD TGEAGTIVDA QEAAENAGLV YVTDDSPGIV RQPYRGKFRY RDARGNVVTD
EKTLKRIASL AIPPAYTDVW ICPKANGHIQ ATGRDAKGRK QYRYHPRFRE VRDSTKYEHM
LDFAKALPGV RERIDADLKK RGLPREKVLA AVVHLLETTM IRIGNADYAK QNKSYGLTTL
QDRHVAIDGA ELRFNFKGKS GKQWRLKLKD RRIAKIVKAS QDLPGQHLFQ YVGEDGAQYE
VTSNDINAYL REISGTDITA KDFRTWNGTV LAALALSEYE KVDSQAAAKR NVRTAIEAVA
SRLGNTPTVC RKCYIHPEVF ESYLSDELVL EARDAVEKEL REDLSRLRPE EAVVLAFLQR
RLAEKAKIPA L
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