Gene Swit_5280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5280 
Symbol 
ID5195588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp178072 
End bp178989 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID640579207 
Productresolvase domain-containing protein 
Protein accessionYP_001260155 
Protein GI148550716 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGGCT ATGCCCGCGT ATCGACCGAA GATCAGGACA CGGCCAGCCA ACGCCTTGCG 
CTGGAGCAGC AGGGTTGCGC CCTCATCTTC GAGGACAAGG CCAGCGGGGG AAGCCGGGAC
CGCCCGAACC TCGCCAGGGC GTTGGCAAGG GTAGGGGAGG GCGACACCCT CATTGTCGTG
CGGATCGATC GATTGGCGCG CTCGCTCGTC CATCTGCTGG AGATCGTCGA GCAGCTGCGG
GCGAAGGGCG CCTACTTTCG CTCGATCAAC GACCCGATCG ACACCTCGAG CGCGCAAGGC
ATGCTGATGA TCCAGATGCT GGGCGCCTTT GCCGAATTCG AACGCGCCCT TATCCGAGAA
CGCACGCGGG CAGGGCTTGC CGCGGCGATG GCGAAGGGCG CCAAGCCCGG CAATCCCAAG
ATGCGCGCGC GCGATCCGGC GGCAATCGCG GATATCGGCT ACGCGCACAA AGAGCGTTAT
CTGCACGCCT TGATCGACGA TCGCCACCGC TGGCTGCCGA CCGTAGAGCG CCTGCGACCC
CATCTTCCCT GGTCGATAGT CTTGCGCCAG ATCCGCGCGA TAAAGCCCCC CGTCCGGTCA
TTCAGTGAGC GCACGCTGGT GAAGGCCTGC AGGGCCCTGG TCAAAGCCGG TTATGCTGAC
GCCGTTATCC TTCAGGCCGC GCCGCGCCTG CCACCGGATA CCCGCGTCGC GCGCCTGGTG
GCGGACAGGT TGAAGACATA TCCGGGAGCG TCTCTGCGCG ACCTTGCGGG CTGGCTCAGC
AGAGACTTGC GCGAACCTAC GCCACGCGGC GGCATACACT GGTCGGCTGA GGGCGTGCGG
CGTGTTCTGG AACGGGCGAG GGAGCTCGGG CTTCTCCTAG ATCGCGAGGC GTCTTCGGAC
CTCTGTCTGA TCGCCTAA
 
Protein sequence
MIGYARVSTE DQDTASQRLA LEQQGCALIF EDKASGGSRD RPNLARALAR VGEGDTLIVV 
RIDRLARSLV HLLEIVEQLR AKGAYFRSIN DPIDTSSAQG MLMIQMLGAF AEFERALIRE
RTRAGLAAAM AKGAKPGNPK MRARDPAAIA DIGYAHKERY LHALIDDRHR WLPTVERLRP
HLPWSIVLRQ IRAIKPPVRS FSERTLVKAC RALVKAGYAD AVILQAAPRL PPDTRVARLV
ADRLKTYPGA SLRDLAGWLS RDLREPTPRG GIHWSAEGVR RVLERARELG LLLDREASSD
LCLIA