Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5270 |
Symbol | |
ID | 5195733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 165126 |
End bp | 166805 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579197 |
Product | signal transduction histidine kinase |
Protein accession | YP_001260145 |
Protein GI | 148550706 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0784] FOG: CheY-like receiver [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.909185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATG TGGTGCCTTT CGGGGCCACG TCGTCTGCCC ATCGCCCGCT CGAGCAAGCG GGCGGACCAT TCGCCGACAT CGACCTCATC CACTCGATCA GCGTCGCGCT GAGCGGCGAG CAGGACCGCG TCGAGCTCTA TGGCAAGATT GTGGACGCGG CGATCACCAT CACCCAGTCG CAGTTCGGTA CGATGCAGCT CGTCGTGCCG CCCGGCGATG TCTCGGGCCA TGCGGGCTGC CTCCAGCTTC TCTGCTCGCG TGGGCTGCCG CCTGAGGCGG TGCAGTTCTG GCAGATCGTC AGCCCCGCGG CTCACAGCAG TTGCACCAAG GCGCTCAAGA CCGGCAGCCG CGCGATCATT CCCGATTATG AGGAATGGGA CGAAATCGCG GGCACCGAGG ATCTCGAGGC GTTCCGCCGC ACCGCCATCC GATCCGCGCA GACCACGCCG CTTCTCGCGC GCGACGGACG CCTGCTCGGG ATGATCTCGA CCCATTGGAC CGAGCCGCAC GAGCCCTCGC CGCGCGATCT CCGGCTCCTC GACATCCTCG CCCGCCAGGC GGCCGATCTT CTCGAACGGA CGATTGCCGA CGAAGCGCTG CGCGAACGCA AGGAGGAACT CGACCGGACC TGCGCGGCGC TGCGCGAATC CGAGCAGCTC CGGAAGATGC TGACCGGCGA GCTCAGCCAC CGCGTCAAGA ACATGCTCGC AACCGTCCAG GCAATCTCGA CACAGACCCT GCGCAACTGC AGCGATCCCG CCGAATTCGT CGAGAGCTTT TCGGGCCGCA TCCAGTCGAT GGCCCGGGTC CACTCGCAGC TCAGCACCAC GGACTGGAAA GGCACGGAGC TACGCGCCGT CGTCGAAGAG GGGATGAAAC TCGGACCCGT CGACGAGCCG CAGATTGCCG CGTCAGGCCC CGACATCCAT CTCAATGCCA ACGCCGTGCC GAAGATGGCG ATGATCCTGC ACGAGCTCGG CACCAATGCG CGCAAATACG GCGCTCTCTC TCGTGCCGGC GGCACGGTCG ACATCCGTTG GACTGTCCGA CCGGGACAAC TCGCGCTCAG CTGGACCGAG CGCGGTGGTC CCAGGGTCCA GGCGCCCGTC CGCCGCGGCT TTGGATCGCG GCTGATCGAA GCGACCGTTC GCGGCGTTCA CGGCAATGCC GATATGAGCA TCGAGGCCGA GGGCGTACGC TGGGAGATCC AGTTTCCGCT GCCGGACGAC GAGGACTCAG CAATCGAAGC TGGCAAGCGG CGGGCGGGGC AGGGTTCGCT CGCCGAGCAG GCCGGCCTTG GGCCATCGCG CCAACCGGCA TGGCACAATC TTGCAGGCAA GCACGTGCTT GTCGTCGAGG ACGAGCCGCT CCTGGCCCTC GATATCGTCG GCCAGCTCGA GGACGCAGGT ACCATCATCG TCGGACCCGC CGCCGATCTG CGGGCGGCGC TCGACCTCAT CGCACACCAT CGGATCGACA TCGCCCTGCT CGACGCCAAT CTCTCGGGTG AACCGGTCGA CGATATCGCG CATGCGCTCG CCGCGCGGTC CATCCCCTTC CTGTTCATGA GCGGCTATGG GCGCGAGAAC CTGCCCCCGG CTTTCCCGCA CATCGAACTG CTCTCCAAGC CCTTCGACGC GCGGCAGCTT CTCACGCTTG CCGACAGGAT GCTTGCCTGA
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Protein sequence | MSNVVPFGAT SSAHRPLEQA GGPFADIDLI HSISVALSGE QDRVELYGKI VDAAITITQS QFGTMQLVVP PGDVSGHAGC LQLLCSRGLP PEAVQFWQIV SPAAHSSCTK ALKTGSRAII PDYEEWDEIA GTEDLEAFRR TAIRSAQTTP LLARDGRLLG MISTHWTEPH EPSPRDLRLL DILARQAADL LERTIADEAL RERKEELDRT CAALRESEQL RKMLTGELSH RVKNMLATVQ AISTQTLRNC SDPAEFVESF SGRIQSMARV HSQLSTTDWK GTELRAVVEE GMKLGPVDEP QIAASGPDIH LNANAVPKMA MILHELGTNA RKYGALSRAG GTVDIRWTVR PGQLALSWTE RGGPRVQAPV RRGFGSRLIE ATVRGVHGNA DMSIEAEGVR WEIQFPLPDD EDSAIEAGKR RAGQGSLAEQ AGLGPSRQPA WHNLAGKHVL VVEDEPLLAL DIVGQLEDAG TIIVGPAADL RAALDLIAHH RIDIALLDAN LSGEPVDDIA HALAARSIPF LFMSGYGREN LPPAFPHIEL LSKPFDARQL LTLADRMLA
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