Gene Swit_5261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5261 
Symbol 
ID5195645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp149991 
End bp150926 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID640579188 
Producthypothetical protein 
Protein accessionYP_001260136 
Protein GI148550697 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.798907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGC CTGCACGAAC CGGCCGGGAT GCCGCGGCCG AAATCAGCGC CATCATCATC 
GATCGCCTTG AAAAGGGCGT ACCGCCCTGG ACCCGGCCCT GGCGCACGAG TGGCAGCGGC
GGCCGGCCGC TCCGGCACTG CGGCACGCCC TATACGGGGA TCAACAATCT CCTGCTTTGG
GCGCTCGGCG ACATGCACGG CTACCGGTCG CGCTACTGGA TGACCTATCG GCAGGCGAGC
GAGCTCGGCG CGCAGGTCCG CCGCGGCGAG CAGGGCGCCC TGTCGGTCTA TTATTCCTCG
TTCAAGAAGA CCGAGACAGA CGCCGCGAGC GGTGAGGCCG TGGAACGCAG CATCCGCTTC
CTGCGCCATT ACATCGTCTT CAACGCCGAC CAGATCGACG GCCTGCCCGG CTATTACTAC
CCGCCCGAGG TGCCGGCGAC GCCGCTGTCC CCCTCTCTGC GGCAAGCGGC GATCGACAGC
TTCTTCGCGG CGATCCCCGC CGATGTCCGT CATGGCGGTA ACGGCGCCTT CTACTCGCCC
ACCTTCGACT ATATCCAGAT GCCCAAGCGC TCGAGCTTCA TCTCGATGGA CCATTATGCG
AGCGTCAGGG TCCATGAAAC GGGGCACTGG ACCGGCCATG GCGACCGGCT CGCGCGCACC
TTCGGCAAGC GCTTCGGCGA CAAGGCCTAC GCATTCGAGG AACTTGTCGC CGAGATCACC
GCCGGGCTGG TCTGCGCCGA GCTTGGCCTC CCCAACGAGC TACACGACAG CCACGCGAGC
TATGTCGGCC ACTGGCTCGG GATCCTCAAG GCCGACAAGA CCGCCATCAT CCACGCCGCG
TCCAAGGCCG AACAGGCCTT CGTCTATCTG ACGGCGTTCG GCGAGGTCGG GCAAGCGGGC
AGCGCCGCGG CGTCCGAACT TGCCGCGGCT GCGTGA
 
Protein sequence
MSKPARTGRD AAAEISAIII DRLEKGVPPW TRPWRTSGSG GRPLRHCGTP YTGINNLLLW 
ALGDMHGYRS RYWMTYRQAS ELGAQVRRGE QGALSVYYSS FKKTETDAAS GEAVERSIRF
LRHYIVFNAD QIDGLPGYYY PPEVPATPLS PSLRQAAIDS FFAAIPADVR HGGNGAFYSP
TFDYIQMPKR SSFISMDHYA SVRVHETGHW TGHGDRLART FGKRFGDKAY AFEELVAEIT
AGLVCAELGL PNELHDSHAS YVGHWLGILK ADKTAIIHAA SKAEQAFVYL TAFGEVGQAG
SAAASELAAA A