Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5261 |
Symbol | |
ID | 5195645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 149991 |
End bp | 150926 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640579188 |
Product | hypothetical protein |
Protein accession | YP_001260136 |
Protein GI | 148550697 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4227] Antirestriction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.798907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGC CTGCACGAAC CGGCCGGGAT GCCGCGGCCG AAATCAGCGC CATCATCATC GATCGCCTTG AAAAGGGCGT ACCGCCCTGG ACCCGGCCCT GGCGCACGAG TGGCAGCGGC GGCCGGCCGC TCCGGCACTG CGGCACGCCC TATACGGGGA TCAACAATCT CCTGCTTTGG GCGCTCGGCG ACATGCACGG CTACCGGTCG CGCTACTGGA TGACCTATCG GCAGGCGAGC GAGCTCGGCG CGCAGGTCCG CCGCGGCGAG CAGGGCGCCC TGTCGGTCTA TTATTCCTCG TTCAAGAAGA CCGAGACAGA CGCCGCGAGC GGTGAGGCCG TGGAACGCAG CATCCGCTTC CTGCGCCATT ACATCGTCTT CAACGCCGAC CAGATCGACG GCCTGCCCGG CTATTACTAC CCGCCCGAGG TGCCGGCGAC GCCGCTGTCC CCCTCTCTGC GGCAAGCGGC GATCGACAGC TTCTTCGCGG CGATCCCCGC CGATGTCCGT CATGGCGGTA ACGGCGCCTT CTACTCGCCC ACCTTCGACT ATATCCAGAT GCCCAAGCGC TCGAGCTTCA TCTCGATGGA CCATTATGCG AGCGTCAGGG TCCATGAAAC GGGGCACTGG ACCGGCCATG GCGACCGGCT CGCGCGCACC TTCGGCAAGC GCTTCGGCGA CAAGGCCTAC GCATTCGAGG AACTTGTCGC CGAGATCACC GCCGGGCTGG TCTGCGCCGA GCTTGGCCTC CCCAACGAGC TACACGACAG CCACGCGAGC TATGTCGGCC ACTGGCTCGG GATCCTCAAG GCCGACAAGA CCGCCATCAT CCACGCCGCG TCCAAGGCCG AACAGGCCTT CGTCTATCTG ACGGCGTTCG GCGAGGTCGG GCAAGCGGGC AGCGCCGCGG CGTCCGAACT TGCCGCGGCT GCGTGA
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Protein sequence | MSKPARTGRD AAAEISAIII DRLEKGVPPW TRPWRTSGSG GRPLRHCGTP YTGINNLLLW ALGDMHGYRS RYWMTYRQAS ELGAQVRRGE QGALSVYYSS FKKTETDAAS GEAVERSIRF LRHYIVFNAD QIDGLPGYYY PPEVPATPLS PSLRQAAIDS FFAAIPADVR HGGNGAFYSP TFDYIQMPKR SSFISMDHYA SVRVHETGHW TGHGDRLART FGKRFGDKAY AFEELVAEIT AGLVCAELGL PNELHDSHAS YVGHWLGILK ADKTAIIHAA SKAEQAFVYL TAFGEVGQAG SAAASELAAA A
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