Gene Swit_5257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5257 
Symbol 
ID5195811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp147126 
End bp148154 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content67% 
IMG OID640579184 
Producthypothetical protein 
Protein accessionYP_001260132 
Protein GI148550693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.846255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGT CCTCGTCCCA ATCGCGCGCG ATCATGCTGA TGGTCGGGCT GCCGCATCTT 
CGCTCCGGCC CGTTGCTCGC CCGCGCGCGC AATCTTGCCC TGCCGGTCCT CGTCTCGGCC
AATGCCTTCT CCCGCTGGGT GGACGCCGGG CAGGGACGTG AATGGGCCGG CTGGAAACTC
CAGGACCTGG AGAATGCGGC CAGTCTCCAC AGTCTTTGCC TGGACAGCGC CGGGTTCAGC
GCCATGGCCC ACTATGGCGG CTATCCCTGG ACCATCGACG CCTATGTCGC GCTCGCGTCC
GCCTTTCCCT TTCGCTGGTG GGCAAGCCTC GACTATTGCG TGGAGCAGGA GGTTGCCCGC
GACCGCGAGG AGGTCCTCGA CCGGATCGCG CGCACCGTCC GGGCCAATAT TGAATGCCAT
GCGCGCGCTG TCGATCGGAA TATCGCCAGC ACATTCCTGC CGGTCATCCA GGGCCGCCTG
CCGCAAGATT ACGAACGCTG CGCCACTGCG CTCGCGGGGC TTGTCGAGCG CCATCCCCTC
ATCGGTGTCG GATCGATGTG CCGACGACCC ATCCATGGCG ACGCCGGTCT TATTGCGGTG
GTCGATCATC TCGATCGCGT CCTGCCGCCA GCGGTGCGGT TGCATCTCTT CGGCGTCAAG
GGCGCGGCCA TTCCCTTCCT CAAACCCTTC GCGCGCCGCG TCGCCTCGAT CGACAGTCAG
GCCTATGGCA TCGCAGCGCG CAGCAAGGCG CGGGTGCATG GTTGTCGAAA GTCGGATGAC
CTCGTCGCCG ACGAGATGGA GCGGTGGGTC GAGCAGCAGC GGGCGCGGCT ACGCCAGCCT
GCCCGCCCCC TGCCGATCGC GGCGCCTGCG ACAGCGCCGC CGCTGCGGTT CGATCCCTGG
GAAGAGGCGA TCGCTAAGGC GCGGGAAGAC CTGCGGGCGC TCATCGAAAG CGGCGACCTC
GATCATGATG CGCTTGTGAC CGGATGGGTC GAGCAATGGG CCGCAGACCT GCTGCACGCC
GAGCCTTGA
 
Protein sequence
MMTSSSQSRA IMLMVGLPHL RSGPLLARAR NLALPVLVSA NAFSRWVDAG QGREWAGWKL 
QDLENAASLH SLCLDSAGFS AMAHYGGYPW TIDAYVALAS AFPFRWWASL DYCVEQEVAR
DREEVLDRIA RTVRANIECH ARAVDRNIAS TFLPVIQGRL PQDYERCATA LAGLVERHPL
IGVGSMCRRP IHGDAGLIAV VDHLDRVLPP AVRLHLFGVK GAAIPFLKPF ARRVASIDSQ
AYGIAARSKA RVHGCRKSDD LVADEMERWV EQQRARLRQP ARPLPIAAPA TAPPLRFDPW
EEAIAKARED LRALIESGDL DHDALVTGWV EQWAADLLHA EP