Gene Swit_5244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5244 
Symbol 
ID5195739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp133208 
End bp133666 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content68% 
IMG OID640579172 
Producthypothetical protein 
Protein accessionYP_001260120 
Protein GI148550681 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG GTTCCATCGC CAAGAACGCC GCCGGCCACC TCGTCGGCCG TGTGTCCACC 
CTGACCGTCG AGCTCACCAT CGCGCTGCGC CCGGTCCACT CGGCCAATCC CAATGCGCCC
AAGTTCGAAG TGATGGCGCT GTCGGCGGCG CGCGCCTGGG TCCGTGTCGG CGCATTGTTC
GAGCTCGCCT CGCGCGAGAG CGGCCTTATC TTCTACAACG GCAAGATCGA GGACCCGAGC
TTCGCCCAGC CGCTCTATGT CTCGCTGTTC CAGCAGCAGG ACGGCTCCTA CAATGTGGTC
TGGTCGCGCC CCTCGCGCCG CCGCGAACTC CCCGCCGAAA TGGCGATGCC CGCCGATGAC
GGCCTGCCGC CGCTGCCGGG CGAAGAGGCC TCCCAGGCCG GACAGAGCGA ACCCGATGGG
CTGGGCACCA GCTCGGCTCC GCCTGCCTTC GCCGACTGA
 
Protein sequence
MNIGSIAKNA AGHLVGRVST LTVELTIALR PVHSANPNAP KFEVMALSAA RAWVRVGALF 
ELASRESGLI FYNGKIEDPS FAQPLYVSLF QQQDGSYNVV WSRPSRRREL PAEMAMPADD
GLPPLPGEEA SQAGQSEPDG LGTSSAPPAF AD