| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5242 |
|---|
| Symbol | |
|---|
| ID | 5195619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009507 |
|---|
| Strand | - |
|---|
| Start bp | 132031 |
|---|
| End bp | 132546 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640579170 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260118 |
|---|
| Protein GI | 148550679 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAGCA TTTTTGATAT CGGCGCGGCG CCGGCCAATG AGGACTGCGC CCAGATCGGC
CACACGCCCG ACTTCGATGC GTGCAACCGC CTCGAAGTGG AGAGCTACCG CGCCGCCATC
CAGGCCCGCT TCGGTCCCCC GCCCGAGGGC TGTGCGCTCG TCGCTATCGG CAACGCCCAT
GATTTTGGGC GTTACCGTAC CCTCGGGCTC AAGGTCTGGC GCTTCGCGCA GGACCGCGCC
CAGGTCGCCG CCTATGTCGA GGCCGCCGAA AACGGCCTCT CGACCTGGAT CGAAGCGGGC
TTCACCGCGC CGATCCGCTA TGCGCCGGGC GGCGACGTGC TGGAGCGGCG GTCGGGCATC
GACGAGATCG TCATCGGCGC GCTCATGACG ACCCGGCCCG ACAGCGGCGG TCATTTCCCG
ATCCCGGACT TCGCGCTTCT CCATGCCAAT ATTGCGGCCG CCTATCCCGC TTGCGCGGCC
CAAGCGCGCG CCCGCCTCGC CGCCCTCTGC GGCTGA
|
|---|
| Protein sequence | MFSIFDIGAA PANEDCAQIG HTPDFDACNR LEVESYRAAI QARFGPPPEG CALVAIGNAH
DFGRYRTLGL KVWRFAQDRA QVAAYVEAAE NGLSTWIEAG FTAPIRYAPG GDVLERRSGI
DEIVIGALMT TRPDSGGHFP IPDFALLHAN IAAAYPACAA QARARLAALC G
|
|---|
| |