Gene Swit_5236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5236 
Symbol 
ID5195757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp128644 
End bp129168 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content71% 
IMG OID640579164 
Producthypothetical protein 
Protein accessionYP_001260112 
Protein GI148550673 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.642352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG GTTCCATCGC CAAGAACGCC GCCGGCCACC TCGTCGGCCG TGTCTCCACC 
CTGACCGTCG AGCTCACCAT CGCGCTGCGC CCGGTCCACT CGGCCAATCC CAATGCGCCC
AAGTTCGAAG TGATGGCGCT GTCGGCGGCG CGCGCCTGGG TCCGTGTCGG CGCGCTGTTC
GAGCTCGCCT CGCGCGAGAG CGGCCTCATC TTCTACAACG GCAAGATCGA GGACCCGAGC
TTCGCCCAGC CGCTCTATGT CTCGCTGTTC CAGCAGCAGG ACGGCTCCTA CAATGTCGTC
TGGTCGCGCC CCTCGCGCCG CCGCGAACTC CCCGCCGAAA TGGCGATGCC CGCCGATGAC
GGCCTGCCGC CGCTGCCGGG CGACGACGCC TCCCAGGCCG GACAGCGCGA GCCCGAGGGG
CTGGGCGCCT CGACCGCCGG CGACGATTTT GGCGGCGATG ACGCGCAGGC GCCGGCTCAG
GGCCGCCGCG GCCGCTGCCA GCGCGCGGTC GAAACCGCCG ACTGA
 
Protein sequence
MNIGSIAKNA AGHLVGRVST LTVELTIALR PVHSANPNAP KFEVMALSAA RAWVRVGALF 
ELASRESGLI FYNGKIEDPS FAQPLYVSLF QQQDGSYNVV WSRPSRRREL PAEMAMPADD
GLPPLPGDDA SQAGQREPEG LGASTAGDDF GGDDAQAPAQ GRRGRCQRAV ETAD