Gene Swit_5229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5229 
Symbol 
ID5195793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp121760 
End bp122734 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content66% 
IMG OID640579157 
Producthypothetical protein 
Protein accessionYP_001260105 
Protein GI148550666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.293502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACT TCACCAACTT CGCCGATCTC GCCAGCTTCA TCGCCGCAAG CCGCGACAAT 
GACGATGCCA GCCGCAATTA TGGCGCCGCC TTCATCGAGC ATAGCGAGAT GGCCAAGCTC
TCCATCGTCG AGGCGCCCGA AGCGCTCGAC ATGCCCGACC CCGAACAGGT CCGCGCCGCG
GTCGACATGA TGATGCAGAC AATGTTCGAC GTCCTGCGCG ACACCAGGAT GGAGGCCTAT
GCCGCCGATC TCGCCTGGGG CTTTGCCAAC AGCTTCCATG TCGTGGCCAA GCGCATCGAG
GGCCGCGAGG ATGATGCCGC CAAGACGCTC GGGGAGCTCG CGCGCCACTA CGACCCCTCG
GAAATCTACG CGACGGAACT CGAGGACACG CAGCTGCTCT GCCAGACGCT GCAGGGATGC
CGCGAAGCGA TGGAATGCAT GCGCGACCAT GCCGCCGAAG TCTACCGGGT CGAGACCGGC
AAGCCCTTCT CGCCCGTCAA GGGCAGCCGG GTATCCTCCG CGCTCAGCGC CTCGATGATC
GACGCGCGCG ATTATCTGGC AGGACGCGCC CGGACGCGCC GCGAACAGTT CGCGCCCGAT
GGTCCGGTGG TGATCTTCTC GGGCGGCCAG GTCTGGGAAG ATCATGACCT GCTCTACAAG
GGCCTCGACC GCATCAAGAC GCGCATCCCC GAGATGATCC TCGCCACGAC CGCGCAGGCC
AAGGGCTGCG ATGCCATCGC CCACGCCTGG GCCGCCTCGC GCGGCGTCAA GGTCATCCAG
TTCCGCCTGG ACCGCAGCCA GGGCAACCGC GCCGCCTTCG TCCGCAACGA CCGGCTGGTG
AACCTCAAGC CCGTCGAAGC GGTCATCTGC GAAGGCTCGG GCATCCAGAT GAACCTCGCC
CAGAAGCTGC GCCAGGCCGG GGTTCCGCTC CACGTCGTCA ATCTTGCCCA CCAGCGGACC
GCCAAGCGGG CATGA
 
Protein sequence
MTNFTNFADL ASFIAASRDN DDASRNYGAA FIEHSEMAKL SIVEAPEALD MPDPEQVRAA 
VDMMMQTMFD VLRDTRMEAY AADLAWGFAN SFHVVAKRIE GREDDAAKTL GELARHYDPS
EIYATELEDT QLLCQTLQGC REAMECMRDH AAEVYRVETG KPFSPVKGSR VSSALSASMI
DARDYLAGRA RTRREQFAPD GPVVIFSGGQ VWEDHDLLYK GLDRIKTRIP EMILATTAQA
KGCDAIAHAW AASRGVKVIQ FRLDRSQGNR AAFVRNDRLV NLKPVEAVIC EGSGIQMNLA
QKLRQAGVPL HVVNLAHQRT AKRA