Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5221 |
Symbol | |
ID | 5195769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 112193 |
End bp | 112594 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640579149 |
Product | hypothetical protein |
Protein accession | YP_001260097 |
Protein GI | 148550658 |
COG category | [S] Function unknown |
COG ID | [COG3152] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.170062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTG GCGAAATCCT GCTGTCTCCG AAAGGTCGAG TGGGCCGCGC CCCGTTCCTG GCGGTTGTGG CCACAGGTTG GGCGATCGCG TTCGATCTCC TGCCTTTCAA CCCGCTGCTC GCGCTACGCT ATGCCGCCAC CATCAATGTC GCGGTCGTCG TCATTAGCGC GCTGGCGGTC TGGGTGGGGA TCGCCATTAC GGTCAAGCGT TTCCACGACG TTGGATTATC GGGGTTCAAT ACGGTCGGAT TGGTCTGGGC GACGCTGCGC GGCGACCCGC TGGCGATCGA CGCGCCTTTG GCCATGGCCA TCGCGGCCTT TGGGATCATC ACCCAGCTAT GGCTTTGCAT AGAGCCGGGC TCGCGGAGCG CCAATCGCTT CGGCAATCCC GTGTCGGCTT AA
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Protein sequence | MDIGEILLSP KGRVGRAPFL AVVATGWAIA FDLLPFNPLL ALRYAATINV AVVVISALAV WVGIAITVKR FHDVGLSGFN TVGLVWATLR GDPLAIDAPL AMAIAAFGII TQLWLCIEPG SRSANRFGNP VSA
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