Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5218 |
Symbol | |
ID | 5195801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 108667 |
End bp | 109212 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579146 |
Product | hypothetical protein |
Protein accession | YP_001260094 |
Protein GI | 148550655 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.589702 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCCAGC AACCCGACCT CTTCGCCTCC GTCGATCCGG TCAGGCAGCC GCCGTCCGAC GACCTGAATT TGCCTGCCCT CATCGAGCGC ATCGCCGATG TTTCGCGGCG GCCGCGCTAT GCCTTCATGG TGCTCAACCT GATCGCCAAG GCGGCGGGGC GGAACAGCGG CAGTGCAGGT CCTTACGTCC AGGTGGATGG CGAGCGCATT CCTTTGCGCG ATTGGCTCTG CGACTCTCTC GTCCCCATTG CGCAGCGCGA TGCGCGCCGC CTCGCCATCG TCGACCAGGT GCGGTCGGGC CTTGAGGCGC AGAAGGCACT GCCTGACGAT CCGCAGGAGG CGGCCCGTGT GGTCCAGGAG GAGGTGAAAG TGCGCATCCG CCGTTCGGGC CGTTGCAATG TCAGCCGCGC TGTCTCGGAC CTCGTAAGAG CCGGCCTTGT GCGCAGGCAT TATCAGGGCT TTCGCGTCGA TCATCATAAT CGCGGTGCGC AGCGCGAAGC GGTTTACACG ATCACCGATG CGGCTGCGCG CGCGTTGCGC GCCTGA
|
Protein sequence | MFQQPDLFAS VDPVRQPPSD DLNLPALIER IADVSRRPRY AFMVLNLIAK AAGRNSGSAG PYVQVDGERI PLRDWLCDSL VPIAQRDARR LAIVDQVRSG LEAQKALPDD PQEAARVVQE EVKVRIRRSG RCNVSRAVSD LVRAGLVRRH YQGFRVDHHN RGAQREAVYT ITDAAARALR A
|
| |