Gene Swit_5218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5218 
Symbol 
ID5195801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp108667 
End bp109212 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID640579146 
Producthypothetical protein 
Protein accessionYP_001260094 
Protein GI148550655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.589702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCAGC AACCCGACCT CTTCGCCTCC GTCGATCCGG TCAGGCAGCC GCCGTCCGAC 
GACCTGAATT TGCCTGCCCT CATCGAGCGC ATCGCCGATG TTTCGCGGCG GCCGCGCTAT
GCCTTCATGG TGCTCAACCT GATCGCCAAG GCGGCGGGGC GGAACAGCGG CAGTGCAGGT
CCTTACGTCC AGGTGGATGG CGAGCGCATT CCTTTGCGCG ATTGGCTCTG CGACTCTCTC
GTCCCCATTG CGCAGCGCGA TGCGCGCCGC CTCGCCATCG TCGACCAGGT GCGGTCGGGC
CTTGAGGCGC AGAAGGCACT GCCTGACGAT CCGCAGGAGG CGGCCCGTGT GGTCCAGGAG
GAGGTGAAAG TGCGCATCCG CCGTTCGGGC CGTTGCAATG TCAGCCGCGC TGTCTCGGAC
CTCGTAAGAG CCGGCCTTGT GCGCAGGCAT TATCAGGGCT TTCGCGTCGA TCATCATAAT
CGCGGTGCGC AGCGCGAAGC GGTTTACACG ATCACCGATG CGGCTGCGCG CGCGTTGCGC
GCCTGA
 
Protein sequence
MFQQPDLFAS VDPVRQPPSD DLNLPALIER IADVSRRPRY AFMVLNLIAK AAGRNSGSAG 
PYVQVDGERI PLRDWLCDSL VPIAQRDARR LAIVDQVRSG LEAQKALPDD PQEAARVVQE
EVKVRIRRSG RCNVSRAVSD LVRAGLVRRH YQGFRVDHHN RGAQREAVYT ITDAAARALR
A