Gene Swit_5212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5212 
Symbol 
ID5195658 
Type 
Is gene splicedNo 
Is pseudo geneYes 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp100937 
End bp101731 
Gene Length795 bp 
Protein Length 
Translation table 
GC content65% 
IMG OID640726265 
Product 
Protein accession 
Protein GI 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.016248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.23168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG CGATCTTTGG CACGCGGAAA TACGACCGGC AGTTCCTGAC CCAGGCGAAC 
GCGGCCTATG GGTTCGATCT CGATTTCCTT GACGTTGCCT TGTCGCCCAC GTCGGCGCAG
CTCGCGCGCG GTTTTGACGT CGCCTGCATC TTTGTGAACG ATATCGCCAA CCGGCAGGTG
CTCGAGATGT TGGCCGAAGG CGGGGTGGGT CTCGTCGCGT TGCGCTGCGC AGGCTATAAC
AATGTCGATC TCGTGGCGGC CGAGACGCTC GGTCTCGCCG TCGTGCGGGT GCCGGGCTAC
TCGCCGCACG CGGTTTCCGA ATTCACGATC GGTCTCCTGC TGGCGCTCGA TCGCAAGATC
CACCGCGCAT GGTCCCGGGT TCGTGAGAAC AATTTTGCGC TCGATGGCCT TGTCGGCCGT
AACCTGCACG GACGTGTCGC GGGCGTCGTG GGAACGGGAC AGATTGGCGG GCTTGTCGCT
CGAGCCTTGC GGGCTGGCTT CGGGTGTGAG GTCCTGGCCA GCGATCCTGT CGTTGACGAA
GCGCTCGTCG CAATCGGCGT GCGCTATGTC GAGCGCGAGG ACCTGCTTCG CGAAGCGGAT
ATTATCACCT TGCACTGCCC GCTCGCGCCC GAGACCCGCC ATCTGATCGA TGGCCGCGTC
CTGGCGGCAG CGCGGCCCGA TCTGGTTCTG GTCAATACCA GTCGCGGCGC GCTTATCGAC
AGCGCCGCGC TGATAGAGGC GCTCAAGGCG CGCCGGCTGG GCGGTGTTGC GCTCGATGTC
TATGAGCAAG AGGCG
 
Protein sequence