Gene Swit_5208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5208 
Symbol 
ID5195732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp97653 
End bp98201 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content59% 
IMG OID640579137 
Producthypothetical protein 
Protein accessionYP_001260085 
Protein GI148550646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.334826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAGG GACCATCGGA TCAAGATATT TCGACGCGGC GCTCGACAAC ACCTCCGGGG 
CTGATCGAGA CTCGCACCCC GTCCTATCCC GGCACGGAGG CGTCGGTTGG TACGGTCATG
ACCTTGGCCG ACGCCTACTG GGATGCCGCG CACAGGCTGC TGCCGCAGAT CGAGAAAGGC
CGGAGTGTCT CGTCCACCCC GGCTAGGCTG TGCGCCATTC AGTCGATCGA GACTTACCTC
AATGCGTTTC TGCTCTTTCA TTCGGTCGAT CGAAAGCAGG TCCGGGGATT GCAGCATGAT
CTCGCCGAAC GGACGCGGTT GGCTGTCGAG AAGGGATTGT CTCTCCGGCG CCGTACCGCG
GAGCATCTGG TCCGATTGAG CGATCAGCGC GATTATCTCA TGGTGAGATA TGGGCCGGAA
CAGCTCAGCG ATCTGTCCGA AATCAATCGG ATGTTCGCCA CGCTCAAAGA GATCGCGGAG
AAGGTGCGGG CAGCGATTTT CGAACAGCCC TATGATCGCT CTGACCGGAG GTTCCGGGTA
TATTGGTGA
 
Protein sequence
MEKGPSDQDI STRRSTTPPG LIETRTPSYP GTEASVGTVM TLADAYWDAA HRLLPQIEKG 
RSVSSTPARL CAIQSIETYL NAFLLFHSVD RKQVRGLQHD LAERTRLAVE KGLSLRRRTA
EHLVRLSDQR DYLMVRYGPE QLSDLSEINR MFATLKEIAE KVRAAIFEQP YDRSDRRFRV
YW