Gene Swit_5206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5206 
Symbol 
ID5195601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp96094 
End bp96870 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID640579135 
Producthypothetical protein 
Protein accessionYP_001260083 
Protein GI148550644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.369756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACCT CACGAAGCCA GCGATGGCGG GAACGCCGCG CCTTATGGGC GACGGACTCT 
CTCATCATCA ATCCGAAGGC CTATTCGGTC GACATCATCG ATCACGCCGT AGCGCGTACG
TTCATCGCCG AGCATCATTA TCTGCCGAGC TATCCGGCAG CCCAGGTCGC AGTCGGCCTC
TTTGGACTCC GCGCGGTCCT GGCAGGCGTG GCCGTCTTCG CGGTTCCCGC GACCGACGCC
GTCATCACCC GGCACACGGG CTTCACCGAT CCGGCAAAGG GATGCGTTCT CGCACGCCTG
ATTCTTCTCG ACCGGGTCCC GCAGAACGGG GAAAGCTTCT TTTGCGCACG GGCCTTCCGA
CTGCTTCGCC AGGCGCGGCC AGCGATCGAA GCCGTCGTTT CCTACAGCGA CCCCGAATTC
GGGCATACCG GCCGGGTTTA CGCCGCTCTT TCCGGGGCGC ACCGGGGCAC CACGCGCCCG
CGTACAGTCC TTCGCGCCGC AGGCCAGACG ATCTCCGATC GGACGCTTTC GAAGATCCGG
CTCCGCGAAC GCGGGATGGA TGGCGCCATC GACCAGATCG TCCGCCTCGG TCTACCGGCG
CCCGGCCTGC GCGAGAGCCC AGCCGCATGG CTCGCCCGCC TTCAGGCCGA GCAGCTCCTG
ACCCGCCACC GCCAATCCGG ACTCTTCACC TACTGCTTCG AGCTCACCCG CAACGCGCGC
CGACAGGGCC GCGCACTCCC GCGGTTGCCC TATCCTAAAC TATTGCCGGG GCCGTGA
 
Protein sequence
METSRSQRWR ERRALWATDS LIINPKAYSV DIIDHAVART FIAEHHYLPS YPAAQVAVGL 
FGLRAVLAGV AVFAVPATDA VITRHTGFTD PAKGCVLARL ILLDRVPQNG ESFFCARAFR
LLRQARPAIE AVVSYSDPEF GHTGRVYAAL SGAHRGTTRP RTVLRAAGQT ISDRTLSKIR
LRERGMDGAI DQIVRLGLPA PGLRESPAAW LARLQAEQLL TRHRQSGLFT YCFELTRNAR
RQGRALPRLP YPKLLPGP