Gene Swit_5198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5198 
Symbol 
ID5195716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp88467 
End bp89435 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID640579128 
Producthypothetical protein 
Protein accessionYP_001260076 
Protein GI148550637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.756457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCA GCGATCGCCC CGCGCCGTCC GCGCGGCCCC GTGACATCGA CTATATCCGC 
GTCGCCGAGC CGGCTCCCGT CGTGCTTGCC TATGGCATCG GCGTCGACAG CACGGCGCTC
CTCGTCGAGC TCGAAAGCCG CGGCACGCCG CCTGATCTCG TGATCACCGG TGACCCGGGC
ATCGAGAAGC CGGAGACCTA TGTCTATCAG GAGATGATGG CGGCGTGGAT GGCCGCGCGC
GGCATCCGCT ACGAGACCGT CCGCTACACG CCAAAGCGCT TCAAGCACTG GCCGCCCTAT
TACGACCTGC TGGCCAATGT CCTCACCAAT GCCACACTCC CCAGCATCAG CCTCGGGCGC
CACAGCTGCA GTCTTAAGTG GAAAGTGGCT CCGCAGGACG CTTTCCTGAA GCAATGGGAG
CCGGCAAAGG CCGCCTGGGC CAGAGGCCAG AAGGTCATAC GCCTCATCGG GTATGATGCC
TCGCCCGCCG ACACGCGCCG CTATAACCAT GCGTCCGCCA TCGCGAACGA TCTGTTCGAA
TGCCGCTACC CCTTGCGCGA ATGGGGCTGG AACCGCGCCG CCTGCATCGC GCGCATAGAG
GCCGCAGGTC TGCCGGTGCC ACCAAAATCG AGCTGTTTCA TCTGCGGGGC GATGAAGCCC
GACGAGGTCC GAGCGCTGCC TTCCTGGTGC CTCAGGCTCA TCGTCCTTGT CGAAGCGCGC
GCAGCTCCAC GCCTGCGCAC GGTCGAAGGC CTCTGGCGCC GTTCGACTGC GACCCGCCCG
GGCCGAATGA CCGACTTCAT CCGCGCCGAA GAACTGCTCC CTGCGGCCGA CATCGACGCG
ATCATCCGCG ATGCGCCGGC CGATCTCATC CGCTTCCAGG ACGTGGCAGG GCACGTCCCG
CTCCCCGAAC GACCGACAAT GGCGGAGTGG CTCGACATGT TCAACGCCGG CCTGTTGGAG
GCAGCATGA
 
Protein sequence
MLASDRPAPS ARPRDIDYIR VAEPAPVVLA YGIGVDSTAL LVELESRGTP PDLVITGDPG 
IEKPETYVYQ EMMAAWMAAR GIRYETVRYT PKRFKHWPPY YDLLANVLTN ATLPSISLGR
HSCSLKWKVA PQDAFLKQWE PAKAAWARGQ KVIRLIGYDA SPADTRRYNH ASAIANDLFE
CRYPLREWGW NRAACIARIE AAGLPVPPKS SCFICGAMKP DEVRALPSWC LRLIVLVEAR
AAPRLRTVEG LWRRSTATRP GRMTDFIRAE ELLPAADIDA IIRDAPADLI RFQDVAGHVP
LPERPTMAEW LDMFNAGLLE AA