| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5197 |
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| Symbol | |
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| ID | 5195814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 86750 |
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| End bp | 87901 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640579127 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001260075 |
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| Protein GI | 148550636 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.273009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.772032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAACC AGTCATCGGA TTATTGCGTT CAGACCTCTG TCATTGTCAG CGTCGAACTC
AGCAAACGCA CTTGGCTTGT GGCATCGCTT ACGCCAGGTG CGGCTAAGAT CTCGCTGCGT
ACGATTCCCG CGGGCGACAG CGCAGCCCTA CTCGGTCACC TTCGCAATCT CGAAAGCAAG
ACGGGCGAGC GTATTGGTAA GCCCGCCGCC ATTCGCCTAT GCTTCGAGAT CGGCTATGAT
GGCTTCTGGC TGGCACGACT GTTGCGGGCA AATGGCATCG ATACTTACGT TCTTGATCCT
GCCAGCTTCC TTGTATCGCG CCGCGGCAAG CGCGTGAAGA CTGACCGCAT CGACGCCGAA
GCCATGATCG GTATCCTCAA AGCCTATCTC GCAGGTGACA AAAGCGTGTG TCGTGTCGTG
GATGTGCCAA CGCCGGATGA GGAAGATGCG CGCCGAGTCA TGCGCGAGCG TGGCGATCTT
GTGCACGAGC GCACCCGGAT TATTTCGCGA ATTAGGGGAC TACTGGCCTT ACAAGGCATC
CAGTCGGTCA AAGCGATCAG CGGCGGTGAC TGGTCAAAGC AACTCGACGA TATGCGTACC
GGCGATGGAC GGCTGCTGCC GCCAAACCTT CGTCGCCAGA TTGAGCGGTG CTTCGGTCGC
CTCGAGCTGC TCAATGAACA GATCAAAAGC ATTGAACGCG ACCGCGCCGA TGTGGTTCTG
GACGAAGCCT CGACGTTTCC GTGCCGCGAA AAAGCGATCC GTCTCGAGCA ACTCAAGGGC
ATCGGTGCCA ACAGCGCAGT GATGCTTGTT GCCGAGGTGT TTTGCCGCAA GTTTGAAAGC
CGACGACACG TCGCTGCTTT TCTTGGGCTG GCCCCCGCGC CCTACGCGAG TGGAGACGTC
TCACGCGATC AGGGCATTAG CAAGGCTGGC AACCACGGAA CGCGCGTTCT GATGGTGGAG
CTTGCGTGGT GTTGGCTACG ATATCAGCCA AGCAGCGAGT TGGCGGTTTG GTATCGCAAC
CGCTTCAAGG GAAACGGCGG GCGCGCGGCC AAGGTCGGGA TTGTGGCGCT CGCCCGAAAA
TTGCTAATCG CGCTTTGGCG CTTCGTGGAA ACCGGACTGG TCCCGCAGGG CGCCGAGCTC
CGCGCCGTCT GA
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| Protein sequence | MENQSSDYCV QTSVIVSVEL SKRTWLVASL TPGAAKISLR TIPAGDSAAL LGHLRNLESK
TGERIGKPAA IRLCFEIGYD GFWLARLLRA NGIDTYVLDP ASFLVSRRGK RVKTDRIDAE
AMIGILKAYL AGDKSVCRVV DVPTPDEEDA RRVMRERGDL VHERTRIISR IRGLLALQGI
QSVKAISGGD WSKQLDDMRT GDGRLLPPNL RRQIERCFGR LELLNEQIKS IERDRADVVL
DEASTFPCRE KAIRLEQLKG IGANSAVMLV AEVFCRKFES RRHVAAFLGL APAPYASGDV
SRDQGISKAG NHGTRVLMVE LAWCWLRYQP SSELAVWYRN RFKGNGGRAA KVGIVALARK
LLIALWRFVE TGLVPQGAEL RAV
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