Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5196 |
Symbol | |
ID | 5195713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 84783 |
End bp | 86432 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640579126 |
Product | ParB family protein |
Protein accession | YP_001260074 |
Protein GI | 148550635 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.791015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCACTC CAGAACCGAG CTGCGCCACG CTGCCGCTCT CGCGCATCGT CAAGGGCGAC AATCCGCGTC GCTATTTCGA CCGGAAAAAG CACGACGATC TCGTCGCTTC GATCCGCATT CGTGGCATCC TGCAGCCGAT CCTGGTTCGT CCGGCACCCA GCTCGGACGA TAGCTACGCC ATCGTCGCCG GCGAGCGCCG GTACAGGGCG GCGCTGGAAG CGTTCGGTTC CGACGGCGAG GTGCCCGCGA TCATCCGCGA GATGACCGAC CAGGAGGCCC TCGAGGCGGC AATCGACGAG AACGACAATC GCGACGACGC CTCGGAGACG GAACAAGCGG ACGCGGCCGT TCGCGTGCTC GCCGCATGCC GTAACGATCG CGCCGAGGCC GCGCGGCGTC TGGGCTGGTC GCGGGCCAAG CTCGATCGCC GCCTGGCGCT CGCCGAACTC TCCGAGGCGG TCAAACTTGC GCTCGACGAA CGGCGGATCA AGGTCGGCCA TGCTGAACTC CTCGCCGCGA TCCCCGCCGA CAAGCAGGAC AAGGCCCTCG AGACCATCCT GGGCTCCGGT CTCGATGTCA GCAAGACCCG CGACCTCCTC ATGCGCGTCA CCCAGAATCT CGGCGCGGCG TGCTTCGACA AGACCGACTG CACCACCTGT CCGTTCAACT CGGCCGCACA GCGAACCCTG TTCGAAACCC ATGTCGATGA CGGCCATTGC ACCAATCCGG GCTGCTTCCA GCTCAAGACC GAGGCGTGGG AAACCGCCCA ACGCGAGGAG CAGGAGCGCG CCGCTGCCGC GGCCAAGGCA GCGGCGCCGC CGCCCGCAGA CGACATCGAG GACGAGGAAC AGGATGACGA CGAAGACGAC GCCATCGACC AGAGCCCGCC GGAAGCGGAC GATCAGGAAG AGGCAGGCGA CCGCGCCTCG CCTTCGGGCA CGGCAGCCAC GCCCGCATCC ACGCCGCCCA CTGTCGTTCA ATCCAAGGGC AGTATAGTCC AGGCGCACAA GCCAACGGTC ACCGTCAAGT CGATCGCCGG CCGCACCAGC GACCTGCGCG AGGCGACGTG GCGCACCGCG CTCGCCCGTG CGCTCGCCGG CAATGCCGCG CACGCCCAGA CCGCGATCCT GGTCGCCGCG ATGTCGGGCA CGCTCTCGCA GATCAAACCG GAGACGCTGA AGGCCCGCGC CGGCCTGCTG GTGGGCGCCT CGTTCCCGGA GCTCGCCTAC AGCGCCAAGA TCGCGGAGAT CCGCGCGTTG CCCGAGGCTC AGGCCGAGAA GGTGCTTTCC GCGATCGGCG CCGCTTATGC CAAGGATGTG CTCACCTTCG GCCATGTCGC CGACCTCGCC CGGACCTTCG ACGTCGACCT GCGCGATGTC TGGCAGGTCG ATAAGACATT CCTCGAGCGC TACACCAAGG ACGAACTCAG GTTCATCGCC CAGGAGTGCG GCCTCGTCGC GCATGTAAGC GAAAAGGCGT TCGCCAAGCT GCTCAGTGCG AAGAAGGCCG ACCTGATCGC TGGCATGCTC AACGCCACCG GCTTCGACTG GGCCGGCCGC CTGCCGAGCT CGATGACGCT CGACGGCCAA TATGGCCCGC CCCCCGTGCC GGCCCAAGCC GAAGAGCCGC TCTCCCGACA AGCCGCCTGA
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Protein sequence | MSTPEPSCAT LPLSRIVKGD NPRRYFDRKK HDDLVASIRI RGILQPILVR PAPSSDDSYA IVAGERRYRA ALEAFGSDGE VPAIIREMTD QEALEAAIDE NDNRDDASET EQADAAVRVL AACRNDRAEA ARRLGWSRAK LDRRLALAEL SEAVKLALDE RRIKVGHAEL LAAIPADKQD KALETILGSG LDVSKTRDLL MRVTQNLGAA CFDKTDCTTC PFNSAAQRTL FETHVDDGHC TNPGCFQLKT EAWETAQREE QERAAAAAKA AAPPPADDIE DEEQDDDEDD AIDQSPPEAD DQEEAGDRAS PSGTAATPAS TPPTVVQSKG SIVQAHKPTV TVKSIAGRTS DLREATWRTA LARALAGNAA HAQTAILVAA MSGTLSQIKP ETLKARAGLL VGASFPELAY SAKIAEIRAL PEAQAEKVLS AIGAAYAKDV LTFGHVADLA RTFDVDLRDV WQVDKTFLER YTKDELRFIA QECGLVAHVS EKAFAKLLSA KKADLIAGML NATGFDWAGR LPSSMTLDGQ YGPPPVPAQA EEPLSRQAA
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