Gene Swit_5195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5195 
Symbol 
ID5195657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp84322 
End bp84747 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content70% 
IMG OID640579125 
Producthypothetical protein 
Protein accessionYP_001260073 
Protein GI148550634 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.615566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.785118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCT CCAGCCTTCT TCCTATGCTC GCCCGCTACT CGCTCGGCTT CGATCTTGTC 
GCCGGCGCCA ACGACACGGT CACCCTGACC ATCCTTCCGC GCAAGGCCGA AGGCGCAAAG
GACAATCTCG AGGCCAGCGA AACCCGGCCG ATCTCGATCA CGGCGACCGC CGCAGAAATC
GATGCGGAGC TCGCCCGGGG CCCTGACGGC GCGCTCGGCC AGCTCATCGC CTCGCGCCGC
ACCCTTGCCG ATCAGATCGC GGAGCAGCGA CAGGCTGCCG AAGCCGCACG GGCGGCCGCC
GCCGAGGCAG CCAAAGCCAA GGCGGCTGCG CCCAAGACGC CCGCGCCTGC AGCCTCACCG
AAGACGCCGG CTCCCAGCAG CCCGCCGGTC GATGCCAAGG CCGAGGAGCC CGCCAGCCTC
TGGTGA
 
Protein sequence
MLISSLLPML ARYSLGFDLV AGANDTVTLT ILPRKAEGAK DNLEASETRP ISITATAAEI 
DAELARGPDG ALGQLIASRR TLADQIAEQR QAAEAARAAA AEAAKAKAAA PKTPAPAASP
KTPAPSSPPV DAKAEEPASL W