Gene Swit_5191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5191 
Symbol 
ID5195604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp80651 
End bp81421 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID640579121 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001260069 
Protein GI148550630 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.511652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTG AGAGCCCCAA GCGCCACTAT CTTCCCGCCG CCTTCGACAA CAGCGCTGTC 
CGAATCCTGC TCGTGGGATG CGGTGGAAAC GGAGCGCAAA TGCTGATGGG GCTCGCCTCG
CTCGATACCG CATTGCGCGC AATTTCCTCA CGCTCGCTCG AGGTCACCGT GGTCGACGAA
GACATCGTCA CCGAGGCGAA TCTCGGCCGC CAGCCCTTCT ACCGCTGCGA TCTCGGCAAT
TCGAAGGCGA GGACGCTGAC CGAACGGATC AACCTTGCCC ATGGTCTGGC CTGGAAGGCG
GTCCACGGCC GCGCACCCGG AGCGATCGGC GTCGACAACA GCCATGTGCT CATCAGCTGC
GTCGACACGG CCTCGGCCCG CCGCGCGCTG GGCGCGGCGC TGCAGGATGC GCGGAACCCG
CCCATCTATT GGTTGGACCT CGGCAACCGC GCCAGCGACG GCCAATATCT GATCGGATGC
CCGGGCCGTG GAACCGGCCG CGACGATAAT CGCCTTCCAA CGGTGCTCGA GGCTTTTCCC
GAACTCGCCG ACGAGGGCCT GGCCGAAGAC GATGCGCCCT CCTGTTCGGT CGCCGAGGCG
CTCGAGCGCC AGTCGCTCTT CGTCAACCGG GTGCTTGCGA GCCACGCGCT GGCGCTCCTG
TTCGATCTGC TCGGACGCGG GTCGATTGGC CACGCCGGCG CCTTCGTGAA TCTTGCCACC
GGGTACAGCG TTCCGATCCC GCTACCTATG AAGGTCGTTT CCCTGTGCTA A
 
Protein sequence
MQPESPKRHY LPAAFDNSAV RILLVGCGGN GAQMLMGLAS LDTALRAISS RSLEVTVVDE 
DIVTEANLGR QPFYRCDLGN SKARTLTERI NLAHGLAWKA VHGRAPGAIG VDNSHVLISC
VDTASARRAL GAALQDARNP PIYWLDLGNR ASDGQYLIGC PGRGTGRDDN RLPTVLEAFP
ELADEGLAED DAPSCSVAEA LERQSLFVNR VLASHALALL FDLLGRGSIG HAGAFVNLAT
GYSVPIPLPM KVVSLC