Gene Swit_5165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5165 
Symbol 
ID5195695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp59709 
End bp60398 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID640579095 
Producthypothetical protein 
Protein accessionYP_001260043 
Protein GI148550604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGGGG GCATCGAACC CCCGCGCACC GCCGGGCGCT GGCGCGCGCC GCACGGACAA 
TACCCGAAAG GGCCAAGGAA AGAGGGGAGA GGCGAGGCGC TTTCAGCCGA GGAGACCAAG
CCCGTGTCCA TCCTGTTCCG CATCACCGAG CCGGCCGACG ATACAGCCTC GCCCAGCGCC
ATCATCACAG CCCGCAAGCT TGCGGCTTTC CGCCGGTTCC TCCGTTCCGA AGGAGATCGT
ATCGGCATCG CGCTGCTCGA ACCCGACGAA TATCTTGGCG ACAGCTTCGA GGCGCGCGTC
TGTCCACTCG CGCTCGCCGC GATCACGGGC ATTTTCGACC ACGAGGCCAC TGTCATCGCA
GTCGTCGAGG AGGCCCAGTT CAGAGGCAAG CGCATCGCGA TCCATCACTG CCCGAGCAGC
GCCGAGATCA TCCTGCGCGT CGCCCTCACG TCCGATCAGG GCGTCGAACT CGATCTCGCC
TACGGCAATG CCTACGCGCT GCTCGAAGCG CTCGCGATCG AGCCTGACAG CGTCGGTGAC
ATCCCCATCG ATCTCCTACG CGCCCGGCTG TCCGATCCGG CCACGCCGAG CCGCGCGGCG
CTGCGCGGTG TCGGTCATTA CCTGCCCCGA CTAGAGCGTC TCGTCGCGAG CGCGCAGGAG
CGCGAGGCTG CCCGCTTCGC ATGGGCCTGA
 
Protein sequence
MRGGIEPPRT AGRWRAPHGQ YPKGPRKEGR GEALSAEETK PVSILFRITE PADDTASPSA 
IITARKLAAF RRFLRSEGDR IGIALLEPDE YLGDSFEARV CPLALAAITG IFDHEATVIA
VVEEAQFRGK RIAIHHCPSS AEIILRVALT SDQGVELDLA YGNAYALLEA LAIEPDSVGD
IPIDLLRARL SDPATPSRAA LRGVGHYLPR LERLVASAQE REAARFAWA