Gene Swit_5163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5163 
Symbol 
ID5195753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp58042 
End bp58857 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID640579093 
Producthypothetical protein 
Protein accessionYP_001260041 
Protein GI148550602 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATC TTCACCACTC CCTGCGCACG CTGTTCAGCA CCCCATTCTG TCCAAACTGC 
ACGACCCTCT TCGACGCCGA GCAATATGAT CATGTCGACG AACGCGCGCG CTGCTCGCAC
TGCGGAACCG TCTATCGGAT CCCCGACGAC CATGTGCCGG ACAATCCGGA TGACGACATC
GACGACGTCC GGCCGGATAC CGCCCATATT GTCCAACCGC ACGAGCCGGG CTACTGGCCA
GCGCAAGCGA CTGGCTTCCG GCTCATTCGC CTGCTCGAAA GATATCTCGC ACTTACCCAG
ACCTGCGGGC GCTTAGTCAG CGTTGCCCAA ACCTCCACCG AACGGGATTT CTTCAGGGCC
GAGCATGACC GGCTCTACCG CCTAACTTGC CGCATCGCAC GCCAGGTCGC CCGATCGAAC
GGCTACGCGA TCCTTCGAGC ACTCTCGGAC GATAGCCCGG CCTATCGCGT GGTGATCCAG
AACCAGCCTA TCGCTCTATC CGGGGGTTCG TGCATCAAGG AGACGCCGCA GTTTCTGACC
CTCGAACAGT TGCGTGCCGA CGCGGAACGG CTCGCCGAAG CGGAGATGCG GGCCACCGCC
GGCGCGACGT ACGAACTCTA CGCCCGCCAG TTCTCCACGG CCTGTGCACG CGCCATCAAC
AAGCTTGATC CGGACCTGCG CCGCTACGCC GTCAAGATCG CCAATGACCA CGGCTACATC
GCGGGCGAGG ACGAGCGATA TGCCGACTTC GGACCCGGCC TATGCTCCCT GACCGGCATC
GACGAACACT ATTGCCATTG CGGCCGTCAC CCCTGA
 
Protein sequence
MDNLHHSLRT LFSTPFCPNC TTLFDAEQYD HVDERARCSH CGTVYRIPDD HVPDNPDDDI 
DDVRPDTAHI VQPHEPGYWP AQATGFRLIR LLERYLALTQ TCGRLVSVAQ TSTERDFFRA
EHDRLYRLTC RIARQVARSN GYAILRALSD DSPAYRVVIQ NQPIALSGGS CIKETPQFLT
LEQLRADAER LAEAEMRATA GATYELYARQ FSTACARAIN KLDPDLRRYA VKIANDHGYI
AGEDERYADF GPGLCSLTGI DEHYCHCGRH P