Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5151 |
Symbol | |
ID | 5195836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 43355 |
End bp | 44752 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640579081 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001260029 |
Protein GI | 148550590 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0369329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGATA GTTACGACGT GATTGTCCTT GGCTCAGGCC CCGGCGGCTA TGTCGCCGCG ATCCGCGCCG CTCAGCTCAA GTTGAACACG GCGATTGTCG AGCGCGAGAA TCTAGGCGGT GTCTGCCTCA ACTGGGGTTG CATACCCACC AAGGCGTTGC TGCGCTCGGC GGAGGTTTTT CGCTACATGC GGCATGCCAA GGATTATGGC CTGGTCGCGG AGAAGATAAC CGCCGATCTG GATGCAGTGG TGAAGCGCTC ACGCGGCGTT GCCAGGCAGC TTAATCAGGG TGTCTCGCAC CTGATGAAGA AGAACGGGAT CGCCGTTTAT ATGGGTGAGG GGAAGCTCAC CGGCAAAGGG AGGCTTTCTG TCACAGCGCC GGATGGTAAG ACCAGTGAGT TGACCGCGAA GAATATTATC ATCGCCACGG GCGCGCGTGC TCGCGATCTG CCGTTCCCGA AAGCCGATGG AAAGCGCGTC TGGACCTATC GCCACGCGAT GAACCCGCCG GAAATGCCGA ACAAGCTGCT TGTTATCGGC TCGGGCGCGA TCGGCATCGA GTTCGCCAGC TTTTACAACG ACATGGGCGC GGAAGTGACA GTCGTCGAGA TGCTGGACAG GATCGTTCCG GTCGAGGATG CAGATGTCTC GACCTTCCTG GAAAAAGCGT TGGTGAAGCA GGGCATGAAG ATCTTGACGG GTGCAGGTGT CCAAAAGCTC GATATCGGTG CCACCGGCGT AACAGTCGCG ATCAAAGCCC GGGATGGCAA ACTTGTTTCG GACGAATACA GCCATGTCAT CGTGGCAATC GGGATCGTCC CAAACACCGA AACCGTTGGG CTTGAGGCAC TGGGTGTGAA AACGGAGCGT GGCCACATTG TTACCGATGG CGCATGCCGC ACCAATGTCG AGGGAATCTG GGCGATCGGA GACGCCACGG CGCCGCCTTG GCTAGCGCAC AAGGCCAGCC ATGAAGGTGT TATCGCGGCA GAAACCATAG CGGGTCAGCA TCCGCACGCA ATGGACCCCA GGAACATTCC CGGCTGCACC TATTGCCACC CGCAGATCGC TAGTGTCGGC CTCACCGAAA CAAATGCGAG GGAAGCAGGT CACGAAGTGA GGATTGGCAC CTTTCCCTTC ATCGGCAATG GCAAGGCTAT CGCGCTCGGC GAGCCAGAAG GCTTCGTCAA GACGGTATTT GATGCCCAAA CTGGCGAGCT GCTGGGCGCA CACATGGTCG GCCCGGAGGT GACCGAAATG ATCCACGGCT TCACCATCGG TCGTACACTG GAAACAACCG AGGCGGAGCT GATGGAAACG GTTTTTCCGC ATCCGACCAT TTCCGAAACG ATGCATGAAA GCGTGCTTGC TGCCTTCGGG CGCGCAGTCC ATATTTAG
|
Protein sequence | MADSYDVIVL GSGPGGYVAA IRAAQLKLNT AIVERENLGG VCLNWGCIPT KALLRSAEVF RYMRHAKDYG LVAEKITADL DAVVKRSRGV ARQLNQGVSH LMKKNGIAVY MGEGKLTGKG RLSVTAPDGK TSELTAKNII IATGARARDL PFPKADGKRV WTYRHAMNPP EMPNKLLVIG SGAIGIEFAS FYNDMGAEVT VVEMLDRIVP VEDADVSTFL EKALVKQGMK ILTGAGVQKL DIGATGVTVA IKARDGKLVS DEYSHVIVAI GIVPNTETVG LEALGVKTER GHIVTDGACR TNVEGIWAIG DATAPPWLAH KASHEGVIAA ETIAGQHPHA MDPRNIPGCT YCHPQIASVG LTETNAREAG HEVRIGTFPF IGNGKAIALG EPEGFVKTVF DAQTGELLGA HMVGPEVTEM IHGFTIGRTL ETTEAELMET VFPHPTISET MHESVLAAFG RAVHI
|
| |