Gene Swit_5146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5146 
Symbol 
ID5195663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp39596 
End bp39904 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content63% 
IMG OID640579076 
Producthypothetical protein 
Protein accessionYP_001260024 
Protein GI148550585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.630327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCACGA CCCAGCTCCA CAACGAGCCC GTGGTCTATA ATCGCAAACG CCATGGCCGG 
TTCAAACTGG ATGGCCGGAT GTACGATTTC CGGATGCGGC CGTCGGTGCC CAGGCGGCTG
TCCAAGGAAG TCCTGCTTGT CGACCTCCTC CATAACATCG ACAGGCTGCC CGAGGACAAG
GTGGCCATCC TGCCGCGTGC GCTTGCCAAG GCAGGGGAGA TGAATAGCGC GCAGCTCGCG
CGTGCGGTGA AGGAATACGG TTCGGCTCGT GCCGAACGGC TCCTCGCGCC CGTGCTGCGA
CCGTCTTAA
 
Protein sequence
MCTTQLHNEP VVYNRKRHGR FKLDGRMYDF RMRPSVPRRL SKEVLLVDLL HNIDRLPEDK 
VAILPRALAK AGEMNSAQLA RAVKEYGSAR AERLLAPVLR PS