Gene Swit_5145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5145 
Symbol 
ID5195710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp38831 
End bp39523 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content65% 
IMG OID640579075 
Producthypothetical protein 
Protein accessionYP_001260023 
Protein GI148550584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.688934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC GTCTTTCGGT CGTTTCTGTG AGCGATTGGG GGATTCACAA GAGTCGTGCT 
TTGTGCTTGA TTCGTTCCAT GCTTCAGTTC GATCTCTTCG CGCCATCGAT CCCAACCCCG
GCGCCAGCAC CAGTAGTTGG CCTGCCGGAT ATCGTGCGCA TCATCGCGGA GCACTCGGGT
CGGCCGCGCT ACACCTTCAT GGTGCTCGAT CTCATCGCCA GGGCCGCCCG GACGAACGGG
GAGGCGGGGC CTCTGGTTCG AGAAGGCGAG GTTCTGGTGC CCATCCGCGA ATGGCTGGCC
GCGGCGATTG CGCCGAGCGG CGCGCGTCAC CACCAGCGCC GGGCCACCGC CGATAAGGTC
CGGGCTGCGC TCGCAGCCAA AGGAGAATTG CCGGGCGATC CGGTGGAGGC CGCGCGCCGC
GTCGACGCGG AACTCAGCGA GCGCATCCGC GAAACCGGCA TGACGGCGAT CAGCCGGGCG
GTGTCGGAGT TGGTGAAGGC AGGACTGATC AGACGGCATT ACCAGGGCTT TTTCGTGGAC
CATGAGAACC GCGGTGCGCA GCGTCATGCG GTCTATACGG TCACGGATGC GGTCCGCGCC
GCGCTTCAGC CGAGCATCGT GACCAGCGAA AACCGGCGGC AGCCTTATGT ACGAGGCGCA
CACGCTCAGC CTCGAGCGGC TGCGGCGCGG TAG
 
Protein sequence
MAKRLSVVSV SDWGIHKSRA LCLIRSMLQF DLFAPSIPTP APAPVVGLPD IVRIIAEHSG 
RPRYTFMVLD LIARAARTNG EAGPLVREGE VLVPIREWLA AAIAPSGARH HQRRATADKV
RAALAAKGEL PGDPVEAARR VDAELSERIR ETGMTAISRA VSELVKAGLI RRHYQGFFVD
HENRGAQRHA VYTVTDAVRA ALQPSIVTSE NRRQPYVRGA HAQPRAAAAR