Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5143 |
Symbol | |
ID | 5195831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 36884 |
End bp | 37858 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640579073 |
Product | patatin |
Protein accession | YP_001260021 |
Protein GI | 148550582 |
COG category | [R] General function prediction only |
COG ID | [COG3621] Patatin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.527098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGA GCGACGTCGG GATCAGGGAA GGTGCGCGCG CGCAGCCGGC CAAACGGTTC CGCATTCTGG CGCTGACCGG AGGTGGGTAT CGTGGCCTCT TTACCGTTCG GATCCTCGAA CAGATCGAGC GGACGATCGG AAAGCCGATC AAAGACCATT TCGATATCAT CGCCGGCACT TCGATCGGCG GCATCGTGGC CATCGGCCTG GCCCAAGGCA TTCGCCCAGC CGTGATCGGC GCCGCGTTTG AGAAGCACGG CCAGGCGATC TTCCCGAAGC GGGGTTTACT CGGTCGCTGG GGGCTGGCGC GCTCGCGCTA TGACGCGGCT GGCCTCGCGC AGACGATCGA CGCCGTTCTT GGCGAAGCGG GAAAGACGCC CCTGTCCGGC CTGAAGACAC CCCTGATCGT GACCGCGGTC GATTTCGGCG CCTGGGCGCC GGCAATATAC GAAACCACTG GCATGTCACC GAAGCTCGAA GGAACCTCGC TACGGGACAT TGCCCTCGCC ACCTCCGCGG CGCCAACCTA TTTCCCCGAC CATGTGATCG ACGGGCATTC CTATGTCGAC GGCGGACTGA TCGCGAACGC TCCGGATAGT ATCGCCCTGA TGCGGGCGCT TGGGCGCTAT GGGCGCACGC CCCAGGAAAT CGACCTCATC AGCGTCGGGA CCGCAGGAGA GCTGCGATGG GATGTGCCGC GTGCGCCCAG GCGCCGCGGC GGTGTGATGC TGATCGCAAA AGACGAGCTC GTGTCGAGGA CGATGAAGGC GCAGGAGAGC CTGTCGCTCG ACCTCGTGCA GTCCGTCCTG GGCTCGAGCT ACGTCCGCAT CGATAGGGTG CCTTCGCTCC AGCAGCAGAA GGAACTTGCG CTCGATCGGG CAACCGACAA AGCGGCCGAG ATCCTGGGAC AGCTCGCGCG CGACGCCTAT GCGGGAGCCT CGGCGAGCAG CACGTTCAAA GCGATGCTTC GATAG
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Protein sequence | MTESDVGIRE GARAQPAKRF RILALTGGGY RGLFTVRILE QIERTIGKPI KDHFDIIAGT SIGGIVAIGL AQGIRPAVIG AAFEKHGQAI FPKRGLLGRW GLARSRYDAA GLAQTIDAVL GEAGKTPLSG LKTPLIVTAV DFGAWAPAIY ETTGMSPKLE GTSLRDIALA TSAAPTYFPD HVIDGHSYVD GGLIANAPDS IALMRALGRY GRTPQEIDLI SVGTAGELRW DVPRAPRRRG GVMLIAKDEL VSRTMKAQES LSLDLVQSVL GSSYVRIDRV PSLQQQKELA LDRATDKAAE ILGQLARDAY AGASASSTFK AMLR
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