| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5132 |
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| Symbol | |
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| ID | 5195607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 19945 |
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| End bp | 21993 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579062 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001260010 |
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| Protein GI | 148550571 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACT ATCTGCTGCT GATACTTCTG CTGGTGCCAT CCGGAGTGCT GGCGCAGCCC
CCCGATGATG CAGGCGCCGA TGCACCTTCG ATCATCGTAA CGGGACAGGG GCTGGGCCTG
CCACCCGGTA CGCCCGCCTA TGGATCGGTG GCGATCGACC GGCAACGGCT GCTCGACAAT
GCGTCGGGCC GGCTGGAGAA TGTGCTGGCC AACGTCGCCG GCTCCCAGCA GTTTCGTCGG
TCGGACAGCC GGGCGTCGAA CCCGTCCAAC CAGGGCGCGA CCCTGCGGGC GCTGGGTGGC
AATGCATCCA GCCGGACGCT GGTGTTGCTG GACGGCGTGC CCGTGGCCGA TCCCTTCTTT
GGCTATATTC CTTTCTCCGC GCTGGTTCCG GACCGTCTGT CCGTTGTGCG GGTGACGCGC
GGCGGCGGGT CGGGTGCGTT CGGCGCGGGC GCTGTCGCCG GCACGATCGA GCTGGCCAGC
GCCACGCGCG ACCAGTTGCC GGATTTCGCT GCCAGCGCCT TCTATGGCAG CCATGACGCC
GCCGAGATGT CGGCCAGCGT CACGCCGGAC CTAGGCGGCG GCTATGTTTC GCTGTCGGGG
CGCTGGGACC GGGGGAACGG CTTCCAGACC ACGCCAAAGT CGCAGCGCGT CGCGGCGACC
GTGCCCGCCG CCTATGATAG CTGGTCCACC AATTTACGCG CGGTCGCGCC GCTCTCCGTG
ACGTCCGAAT TGCAGTTCCG CGCCACGATC TTTCAGGACG ACAGGACGCT GCGGTTCAAG
GGCGCGGACT CCGCGAACGA AGGGCAGGAC GCCAGTGTTC GCTTCATCTC GCGCGGCGAT
TGGCAGGTTG ATGCGCTCGC CTATATCCAG GCGCGCAACT TTTCCAATAT CGTGATCTCC
GCCTCCACCT TCCGCAAGTC GCTCGACCAG CGCAACACGC CGTCCATGGG GCTTGGCGGC
AAGATCGAGA TCCGCCCGCC GGTCGGGTCG GATCATGTAC TGCGGCTGGG CGCGGATACG
CGCTTCGCGC TGGGCGACAT GTATGAGGAC GCCTATGACG CCAATATCGC CAGCAATCCC
GTCACCTTCC GCCGCCATGC CGGTGGGCAG CAGGTGACGA CCGGCCTGTT CGCCGAGGAC
GACTGGACGC TAGAAGGCCT GGTGTTGACC GGCGGCGTGC GGGCGGATCA CTGGACGATC
AGCGACGGCT TCTATCATCA GGCCAACGCC AGCACCGGTG CAGTGACAGC GACCGATTAC
GCCAACCGGT CCGACTGGCA GTTTTCGGGG CGGGCGGGCG CGATCCTGCG CCTGAGCGGC
GCGCTCGCGC TGCGCGGGGC GGGCTATACC GGCTTTCGCC TGCCGACGCT GAACGAGCTG
TACCGGCCAT TCGTGGTCTT CCCGATCACG ACGCAGGCGA ACGCGGCGCT GAAGCCCGAG
CGCCTGAAGG GCGTGGAGGC GGGCTTCGAC CTGACCCCGC TGCCCGGCGT GACCCTGGGC
GCGACCGCCT TCTACAACCG GCTGGACGAT GCGATCGCCA ATGTCACCAT CGGCACCAAC
ACCCGCCAGC GCCAGAATGT TAACCGCATC GTCGCCAAGG GGATCGAACT TACGGCCAGC
GCGCGTCTGG GCGATTTCGG CCTGTCGGCC TCCTATGCCT ACAGCCACAG CGAGGTCGAT
GCGCCAGGCA AGGCGTTCGA CGGCTTCGCG CCCGCGCAGA CGCCGCGCAA CAGCGCCAGC
GCGACGCTGG CCTGGACGCC GGCGCAGGGG CCGACGCTCT CCGCGTCGGT CCATTATGTG
TCGAGCCAAT ATGAGGATGA TCTTCAGATC GACACACTGC CCAGGGCGCT GACCGTGGAT
GCGCTCGCGC GCTTGCCGCT GGGCCATGGC GTCGCGCTGA CGGCGCGGGG CGAAAATCTG
TTCGACGAGA AGGTGGTGAC GTGTCAATCG GCGTGCAAAC GGGACCCCCT ATCGGCGCGC
AAAAGGGACC CCCTTTCACG ATGGCGCAAG GTTGATCGGA CACGCGCCTT TGCGCTGCGC
GCGGCGTAG
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| Protein sequence | MKDYLLLILL LVPSGVLAQP PDDAGADAPS IIVTGQGLGL PPGTPAYGSV AIDRQRLLDN
ASGRLENVLA NVAGSQQFRR SDSRASNPSN QGATLRALGG NASSRTLVLL DGVPVADPFF
GYIPFSALVP DRLSVVRVTR GGGSGAFGAG AVAGTIELAS ATRDQLPDFA ASAFYGSHDA
AEMSASVTPD LGGGYVSLSG RWDRGNGFQT TPKSQRVAAT VPAAYDSWST NLRAVAPLSV
TSELQFRATI FQDDRTLRFK GADSANEGQD ASVRFISRGD WQVDALAYIQ ARNFSNIVIS
ASTFRKSLDQ RNTPSMGLGG KIEIRPPVGS DHVLRLGADT RFALGDMYED AYDANIASNP
VTFRRHAGGQ QVTTGLFAED DWTLEGLVLT GGVRADHWTI SDGFYHQANA STGAVTATDY
ANRSDWQFSG RAGAILRLSG ALALRGAGYT GFRLPTLNEL YRPFVVFPIT TQANAALKPE
RLKGVEAGFD LTPLPGVTLG ATAFYNRLDD AIANVTIGTN TRQRQNVNRI VAKGIELTAS
ARLGDFGLSA SYAYSHSEVD APGKAFDGFA PAQTPRNSAS ATLAWTPAQG PTLSASVHYV
SSQYEDDLQI DTLPRALTVD ALARLPLGHG VALTARGENL FDEKVVTCQS ACKRDPLSAR
KRDPLSRWRK VDRTRAFALR AA
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