Gene Swit_5131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5131 
Symbol 
ID5195761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp19147 
End bp19875 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID640579061 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001260009 
Protein GI148550570 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.701045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.85319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGC ATGACATGAT CGAGGCGATG CGCGGGCTTG GGCTCAAGGG CATGGCGGGC 
GCGTTCGACG ATGCGGTCAC CACCGGCCTT CAGCGCCAGC GCACCACGAT GGAGATACTG
ACCGACCTTC TGCGCGCGGA AGCAACACAT CGCCATGCTG CCTCGATCCG ATACCGGATG
GCGGCCGCCC GGCTGCCGGT CGTGAAGGAT ATCGATGCGT TCCGGTTCGA GGGCACGCCG
ATCAACGAGG GGCTGGTGCG TTCGCTGCAC AGTGGCGCGT TCCTGCCCGC TCGGCGCAAC
ATCGTCCTGG TCGGCGGCAC GGGCACCGGC AAAACCCACC TGGCCATCGC CATCGCCGCC
AATGTCGTTC GCTCGGGTGC GCGAGGCCGC TACTTCAACA CCGTCGATCT GGTGACCCGC
CTCGAAGAGG AGGCCAGGAT CGGCAAGAGC GGCGCTCTCG CCGCCCAGCT ATCCCGACTC
GACCTGATCG TGCTCGACGA ACTGGGATAT CTGCCGTTCG CCCGCTCGGG CGGCCAGTTG
CTGTTCCACC TGATCAGCAA GCTCTACGAG CAGACCAGCG TCATCATCAC CACCAACCTC
GCGTTCGGCG AATGGCCCAC CGTGTTCGGC GATCCCAAGA TGACCACCGC GCTCCTTGAT
CGCGTCACCC ACCATTGCGA CATCGTCGAG ACCGGCAATG ACAGCTGGCG CTTCAAAAAC
CGCAGCTGA
 
Protein sequence
MQRHDMIEAM RGLGLKGMAG AFDDAVTTGL QRQRTTMEIL TDLLRAEATH RHAASIRYRM 
AAARLPVVKD IDAFRFEGTP INEGLVRSLH SGAFLPARRN IVLVGGTGTG KTHLAIAIAA
NVVRSGARGR YFNTVDLVTR LEEEARIGKS GALAAQLSRL DLIVLDELGY LPFARSGGQL
LFHLISKLYE QTSVIITTNL AFGEWPTVFG DPKMTTALLD RVTHHCDIVE TGNDSWRFKN
RS