| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5129 |
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| Symbol | |
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| ID | 5195758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 15110 |
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| End bp | 17425 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640579059 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001260007 |
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| Protein GI | 148550568 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.283474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTTCC GTCATTCCAT TCATGTTTCT GCGCTCGCGT CCGTTGCCAC TCTGGCTCTG
GCGACTGCTG CCTTTTCCGC CCCGGCGATG GCGCAGGAAG CGGCGGCCGA CGACAGCGGC
GCGATCATCG TCACGGCCCG TCGGCGCGAA GAAAGCCTTA TCGATGTTCC GATTTCGGTG
ACGGCGATCA GTGGCGACGC CCTTCAGAAA TCCGGCGCGA TCGACATCAC CGACATCAGC
CAGTCGGTCC CCAACGTCAC CCTGGAAACC TCGCGCGGCA CCAACTCGAC GCTGACGGCG
TTCATTCGCG GCGTGGGCCA GCAGGATCCG GTCGCCGGTT TCGAGGCAGG TGTGGGCCTC
TATCTTGATG ACGTGTATCT GAACCGTCCG CAGGCGGCCG TTCTCGACAT TTATGATGTG
GAGCGGGTCG AGGTGCTGCG CGGTCCGCAG GGCACGCTTT ATGGCCGCAA CACGATCGGC
GGCGCGGTCA AATATGTGAC GAAGCGTCTG ACCACGGACC CCACTCTGTC GGTGCGTGGC
ACCTATGGCA GCTATGATCA GGCCGATGGC GTCATCACGG CATCGACGCC GGTCGGCGAT
GGGACGCTGA AGTTCGGCGG GGCGCTGGCG CGCCTGTCGC GTGGCGGTTT CGGCGACAAT
CTGACGACCG GCCGGGAAAA CTATAACAAG GACGTCTGGG CAGGGCGGTT GAGCGCGCAG
GCCGATGGCG AGGGTTTCTT TGTCCGACTG ACCGGCGATT ACACCAAGGA CAAGAGCGAA
CCGCGCGGCG GCCATCGCCT GATCCCCGGC CTTTTCAGCG GCGCGCCGGT GCTGAACGAT
GTCTACGATA CGCGTGCTGG CCTGCTCGAT CCCAAGCAGG ACGTAGAGGC CTATGGCGTT
TCCCTGTTCG GCGAATTCGA AGTCACGGAC GGTTTCACGC TGCGTTCGAT CACTGCCTGG
CGCAAGGACA ACAGCGCTAC GCCGATCGAT TTCGACAGCC TGGCGGCGGT CGATGGCGAT
GTGCCCGCCT TCCATAACAA CCGTCAGCTT TCGCAGGAAA TCCAGCTGCT GGTGAGCACC
GGCAACCTGA ACGGCCTGAT CGGCGGCTAT TTCCTCGACG CCAAGGCGCG CACCGTGTTC
GACGCGCGCC TGCCCGGCGG GGTCACGCCC CTGACCTTCG GCGATGTGGG CACCGAAACC
TTCGCGATCT TCGGCGACTT CACCTACGAC TTCACGCCGC AACTCAGCCT GTCGGTCGGC
GGTCGCTATA CCTGGGATGA ACGCACGTCG CAGATCCTGC GCCGCACCTA TCTGGGTGGC
GGATCGCCCT TCTTCGGCGG TACGGGGACG CTGTTTGCCA CCACCTCCGA TTTCCGCGGC
TCGCAGACGT TCAAGGAATT CACGCCGCGC GCCTCGCTGT CGTTCAAGCC GACCCAGGAC
CAGACGCTCT ATGCAAGCTA TGCCAAGGGC TTCAAGGGCG GCGGCTTCGA CCCGCGCGGC
CAATCCACCG CATGCCGCAC ACCCACCGGC GGCACGTGCA CCCCGCAGCA GGTGTTCGAT
TTCCTCTCGT TCGATCCGGA AACGGTCGAA ACCTATGAAG TCGGTTACAA GGCGTCCTAT
GGCCGCCGCC TGACCATCGC ATTGTCGGGT TTCTATTCCG ATTATACCGA TGTGCAGGTG
CCCGGTTCGA TCGGCACCAC GGTCAATGGT CAGCAGACGT TCGTGGGCAT CACCACCAAT
GCGGGCAAGG CGCGCATCCA GGGTATCGAG TTCGAAGGAA ACCTGCTGGT CGCCAAGGAT
ATCGGTGCGC CTGGCAGCCG CCTGAACCTC AACTGGGCGG GCGGTTATAT CGACGCCAAG
TACAAGCAGT TCATCGATTC GCGCGGTATC GACGTCGCCA ACCGGCGCGC GTTCCAGAAC
ACGCCGAAAT GGACCGCTTC GGGCACGCTG GCTTATTCGA TCCCGGCCTT TGGCGGCGAT
ATTTCGACCA GCACCACGGT TTCCTATCGC AGCAAGTCGC AGCAGTTCGA ACTGCGCACG
CCGGGTCTGG ATCAGGCCGG CTATGCGCTG TGGGATGCCA GCATCGTGTG GACGTCGGAA
GGCGGCCGTT ATTCGCTGGG CGTGCATGGC CGCAACCTGA CCGACAAGCA GTATATCGTG
TCGGGCAACA ACTTCCTCAG CCAGAATCCG GACACCGGCA ATTTCAATCG CAACGCTGCG
GGCGCGCTGA TCCCGACGCT GGGCCGCGAA GGCGTGCTGA CTGCCTATTA CGGCAATCCG
CGGCAGGTGT TCGTGTCCGC TGGCGTGAAG TTCTGA
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| Protein sequence | MGFRHSIHVS ALASVATLAL ATAAFSAPAM AQEAAADDSG AIIVTARRRE ESLIDVPISV
TAISGDALQK SGAIDITDIS QSVPNVTLET SRGTNSTLTA FIRGVGQQDP VAGFEAGVGL
YLDDVYLNRP QAAVLDIYDV ERVEVLRGPQ GTLYGRNTIG GAVKYVTKRL TTDPTLSVRG
TYGSYDQADG VITASTPVGD GTLKFGGALA RLSRGGFGDN LTTGRENYNK DVWAGRLSAQ
ADGEGFFVRL TGDYTKDKSE PRGGHRLIPG LFSGAPVLND VYDTRAGLLD PKQDVEAYGV
SLFGEFEVTD GFTLRSITAW RKDNSATPID FDSLAAVDGD VPAFHNNRQL SQEIQLLVST
GNLNGLIGGY FLDAKARTVF DARLPGGVTP LTFGDVGTET FAIFGDFTYD FTPQLSLSVG
GRYTWDERTS QILRRTYLGG GSPFFGGTGT LFATTSDFRG SQTFKEFTPR ASLSFKPTQD
QTLYASYAKG FKGGGFDPRG QSTACRTPTG GTCTPQQVFD FLSFDPETVE TYEVGYKASY
GRRLTIALSG FYSDYTDVQV PGSIGTTVNG QQTFVGITTN AGKARIQGIE FEGNLLVAKD
IGAPGSRLNL NWAGGYIDAK YKQFIDSRGI DVANRRAFQN TPKWTASGTL AYSIPAFGGD
ISTSTTVSYR SKSQQFELRT PGLDQAGYAL WDASIVWTSE GGRYSLGVHG RNLTDKQYIV
SGNNFLSQNP DTGNFNRNAA GALIPTLGRE GVLTAYYGNP RQVFVSAGVK F
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