| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BOV_2075 |
|---|
| Symbol | nusA |
|---|
| ID | 5201646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella ovis ATCC 25840 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009505 |
|---|
| Strand | + |
|---|
| Start bp | 2087119 |
|---|
| End bp | 2088732 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640579020 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_001259957 |
|---|
| Protein GI | 148559551 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.183083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCA GTGCTAACAG GCTGGAGCTT CTGCAGATCG CCGATGCGGT CGCCCGCGAG
AAGTCGATTG ACCGTGAGAT CGTTCTTGCG GCCATGGCCG ATGCGATCCA GAAGGCCGCG
CGTTCGCGCT ATGGCCAGGA AAGCAATATC CGCGCCGACA TCAATGCGAA GTCCGGCGAG
ATCAAGTTGC AGCGCCTGCT GGAAGTCGTG GAGAATGTCG AGGATTACGC AACGCAGATT
TCGCTGTTCA TGGCGCGCGA CCGTAATCCC GATGCGCAGG TTGGCGACTT CATTGCCGAT
CAGCTTCCGC CGATGGATTT CGGCCGCATC GCAGCCCAGT CTGCCAAGCA GGTTATTGTG
CAGAAAGTGC GCGAAGCCGA ACGTGACCGC CAGTATGACG AATACAAGGA TCGCGTTGGC
GAAATCGTCA ACGGCACCGT CAAGCGTGTC GAATATGGCA ATGTGATCGT GGATCTGGGC
CGTGGCGAAG CGATCGTGCG CCGCGACGAA CTGATCCCGC GCGAAGCCTT CCGCTATGGC
GACCGCATCC GCGCCTATGT CTATGATGTG CGCCGCGAAC AGCGTGGCCC GCAGATTTTC
CTGTCGCGCA CCCATCCGCA ATTCATGGCG AAGCTCTTCA CCATGGAAGT GCCGGAAATC
TATGACGGCA TCATCGAGAT CAAGTCGGTC GCTCGCGATC CGGGTTCCCG CGCCAAGATC
GCCGTCGTCT CGCGCGATGC GTCCATTGAC CCGGTCGGCG CCTGCGTCGG TATGCGCGGC
TCCCGCGTTC AGGCTGTTGT GGCCGAGTTG CAGGGCGAAA AGATCGATAT CATTCCGTGG
TCGCCGGATG CGGCTTCCTT CATCGTCAAC GCGCTTCAGC CCGCTGAAGT TGCCAAGGTT
GTTCTCGATG AAGATGCCGA ACGTATTGAA GTTGTCGTTC CGAATGACCA ACTATCACTT
GCAATCGGTC GTCGCGGCCA GAACGTCCGC CTCGCCTCGC AGCTTACCGG CTGGGACATC
GACATCCTGA CGGAAGACGA GGAATCCGAA CGTCGCCAGA AGGAATTCGC AGAACGTTCA
AACCTGTTCA TGGAAGCCCT CAACGTTGAC GAAATGGTCG GTCAAGTTCT TGCCTCCGAA
GGTTTCGCCT CCGTTGAAGA ACTGGCCTAT GTGGATGCAG GCGAAATTTC GTCCATTGAC
GGTTTCGACG AAGACACGGC AGGCGAAATC CAGGATCGCG CCCGCGAATA TCTGGAGCGT
ATCGAAGCCG AGCAGGATGC CCGCCGCAAG GAACTGGGCG TTGCCGACGA ACTGCGCGAA
CTGCCGGGCA TGACCACGGC CATGCTGGTT GCCGTTGGTG AAGACGGCGT GAAGACCATG
GAAGATTTCG CCGGTTATGC GGTGGACGAT CTGGTCGGCT GGCGCGAGCG CAAGGATGGC
GACACCATCA ACCATAGTGG TGTTCTGACG CCGTTCGACC TTTCGCGTGT CGATGCGGAG
CAGATGGTGC TGGCAGCGCG CTTGAAAGCG GGCTGGATCA CCGAAGAGGA ACTGGCTGCG
GCTTCCGAAG ACGTGGAAGC TGAAGAAGCT GGCGACGAGG AAGCTGCGTC GTAA
|
|---|
| Protein sequence | MAVSANRLEL LQIADAVARE KSIDREIVLA AMADAIQKAA RSRYGQESNI RADINAKSGE
IKLQRLLEVV ENVEDYATQI SLFMARDRNP DAQVGDFIAD QLPPMDFGRI AAQSAKQVIV
QKVREAERDR QYDEYKDRVG EIVNGTVKRV EYGNVIVDLG RGEAIVRRDE LIPREAFRYG
DRIRAYVYDV RREQRGPQIF LSRTHPQFMA KLFTMEVPEI YDGIIEIKSV ARDPGSRAKI
AVVSRDASID PVGACVGMRG SRVQAVVAEL QGEKIDIIPW SPDAASFIVN ALQPAEVAKV
VLDEDAERIE VVVPNDQLSL AIGRRGQNVR LASQLTGWDI DILTEDEESE RRQKEFAERS
NLFMEALNVD EMVGQVLASE GFASVEELAY VDAGEISSID GFDEDTAGEI QDRAREYLER
IEAEQDARRK ELGVADELRE LPGMTTAMLV AVGEDGVKTM EDFAGYAVDD LVGWRERKDG
DTINHSGVLT PFDLSRVDAE QMVLAARLKA GWITEEELAA ASEDVEAEEA GDEEAAS
|
|---|
| |