| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BOV_1358 |
|---|
| Symbol | tcaB |
|---|
| ID | 5203426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella ovis ATCC 25840 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009505 |
|---|
| Strand | - |
|---|
| Start bp | 1361479 |
|---|
| End bp | 1362690 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640578337 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | YP_001259296 |
|---|
| Protein GI | 148560255 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.24271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCA GTCTTGTGCG CAATGCCATT GTTCTTGGCC TTCTTTCGGC CATCGGTCCT
TTTGCGATTG ATATGTATCT ACCGGCCCTG CCGACCATTG CCACCGATCT GCGGGCGGAA
ACCGGCGCGG TGCAGATGAG CCTGCTCGCC TTCTTTCTGG CACTGGCGCT GGCGCAGCTT
TTCTGCGGGC CCCTGTCCGA TATGGTCGGG CGTAAACTGC CGCTTTATGG CGGGCTGGTG
CTCTTCGCCA TAGGCAGCAT CGGTTCGGCG CTTGCGGCCA ATATCGACGT GCTGGTGCTG
TTCCGTTTCG TCCAGGGATT GGGGGCTGCG GCAGGCATGG TGATACCGCG CGCCATCGTA
CGCGATCTTC ATACGGGTGT CGAGGCCGCG CGCCTTATGT CGCTTTTGAT GCTGGTCTTT
TCGATTTCGC CGATTCTGGC CCCGTTGACT GGCTCCATCA TCATAAGCTT TTTCGGCTGG
CGCGGGGTTT TCTGGGCCGT GTTGCTTGCC GCCGGCATCG GCATCATACT GGTTGCGACC
GCGCAGAAGG AAACGTGCAG CGTCGAGGCG CGGCTTGAGA GCAATATCAG CAGCGCATTG
CGCGGTTACG GGCGGCTGTT GAAGGACCGT CATTTCCTCG GCCTCGTCTT CGTGGGCGGT
TTCGGTCTTG CGTCCTTGTT CGTTTATCTG GCGAATTCCG CCTTCGTGCT GATCGACCAT
TATGGCCTGA CACCGATACA ATATGCCGTG GCATTTTCCG CCAATGCCGT GTCGTTCTTC
GGCGTTTCGC AGCTCAACGG CTGGCTTGGC GCGCGTTTCG GCCTTGGCCG GGTGATGCGC
TTTGCTGCTT GCGGCTTTGC CGCAGCAATG CTTGCCATGT TCGCGGCGGC GCTGATGGGG
CATCAATCAC TCTGGCTGGT CGCAAGCTTC CTCTTTGTCG GTTACGGCTT CCTTGGGCTG
GTTATTCCAG CTACGGCGGT GCTGGCGCTC GAAGAACACG GCGAGATTAC CGGAACGGCA
TCTGCATTGA TGGGCACGCT TCACTTCGTC ATTGGTGGCG TGGCGATTGG TATTGTCGGA
GCCTATTCCG ATGGCACGGC GCTGCCGATG ATTGGCGGCA TCACCGGCTG TGCGCTGGCG
GCGTTCGTGC TGGCGCAGAT CGTCCTTGCC CGCAAGTCGA GAAAGCGCGG CAGAGCAACG
GCGGCAGCCT GA
|
|---|
| Protein sequence | MASSLVRNAI VLGLLSAIGP FAIDMYLPAL PTIATDLRAE TGAVQMSLLA FFLALALAQL
FCGPLSDMVG RKLPLYGGLV LFAIGSIGSA LAANIDVLVL FRFVQGLGAA AGMVIPRAIV
RDLHTGVEAA RLMSLLMLVF SISPILAPLT GSIIISFFGW RGVFWAVLLA AGIGIILVAT
AQKETCSVEA RLESNISSAL RGYGRLLKDR HFLGLVFVGG FGLASLFVYL ANSAFVLIDH
YGLTPIQYAV AFSANAVSFF GVSQLNGWLG ARFGLGRVMR FAACGFAAAM LAMFAAALMG
HQSLWLVASF LFVGYGFLGL VIPATAVLAL EEHGEITGTA SALMGTLHFV IGGVAIGIVG
AYSDGTALPM IGGITGCALA AFVLAQIVLA RKSRKRGRAT AAA
|
|---|
| |