Gene BOV_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBOV_0153 
SymbolrpoN 
ID5203403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrucella ovis ATCC 25840 
KingdomBacteria 
Replicon accessionNC_009505 
Strand
Start bp175043 
End bp176545 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content58% 
IMG OID640577208 
ProductRNA polymerase factor sigma-54 
Protein accessionYP_001258191 
Protein GI148559398 
COG category[K] Transcription 
COG ID[COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog 
TIGRFAM ID[TIGR02395] RNA polymerase sigma-54 factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.128135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTGT CGCCTAAACT TGATATCCGT CAATCGCAAT CGCTGGTGAT GACACCCCAG 
CTCATGCAGT CGATCAAGCT GCTACAGATG ACGCATATCG AGCTCGATCA GTTTCTCGAC
ATGGAAATTG AAAAAAATCC GCTTCTGGAC AGGATCGAGG CAGACAGTGA TGATCTTGCG
GGCGGCGAGC CTGCATCCGG CGCAGACGAC CCCACTGAAA GCGCCGATAA CGATGACTGG
TTCCAGACCG AGGGGGCGGG CGCCGCCGAA AACCTTTCCG CCACTTTCGA TAATTCCCTG
GAAAACATTT TTCCTGATGA TCTGGGCTCC AGCCAAGAGC AATGGAAACT GTCTGCGGGC
GAGGGGGCGT TTTCCGGCAA CGGCTATGAT ATCGATCAGG TAACGGCAGG CCGCCTGTCG
CTCAGTGACT ATGTGGCCGA ACAGATCGTG CTTGGCTTCT CGAAGGCGGC CGACCGTTTC
ATCGCGACGG CGCTCGCCGA TGCGCTGGAT GAAAGCGGTT ATCTTCGTAT CGATATTGTC
GGGCTTGCAC ACAATCTGGG GATCGAGACC GCCGAGATCG GGCGCATTCT GGGTGTGCTG
CAAGGCTTTG ATCCACCAGG GCTTTTTGCG CGCGATCTGC GTGAATGCCT TGCAATCCAG
TTGCGTCTCA AGGACCGCTT CGATCCGGCG ATGGAAGCCC TGATCGCCAA TCTCGATCTT
CTGGCCCGGC GCGATTTTGC AACACTCCAG AAAATCTGCG GCGTCGATCA GGCGGACCTG
ATCGACATGC TGGCCGAAAT CCGCGCGCTC GATCCGAAGC CCGGCGCGCG TTTTGAGGTG
TCGGTTGCCG ATACGATCGT GCCGGATGTG CTGGTTTTTT CCGCGCGTGA TGGTGGCTGG
GCGATCGAGC TCAATCCGGC AACCATGCCC CGCCTCATCG TCAACAATGA ATATTATGCC
GAGGTGAGCG GCTCGGTGAA GACAGAGGAA AAGGCATTTC TTACCGATTG CATGCAGACG
GCAGGCTGGC TGGTGCGCAG CCTTGATCAG CGTGCGCGCA CCATCTTGAA AGTAGCGCAG
GAGATCGTGC GCCAGCAGGA TGGTTTCCTG CGCCATGGCG TGGCGCATCT GAAGCCGCTG
AACCTGCGCA TGGTCGCCGA TGCAGTGGGT ATGCACGAAT CGACCATCAG CCGCGTCACC
GCCAACAAGT TTATGGCAAC CCCGCGCGGC GTGTTTGAAT TGCGCTACTT CTTTACCGCT
TCGCTTGCCT CATCGGAAGG AGGCGAAGCC CATTCCTCCG AAAGCGTGCG CCATCGCATC
CGCCAGATGA TCGAGGCGGA AAAGCCCGAT GAAGTTCTCT CCGATGATGC CATCGTGGAT
GCGCTGAAAA AGGACGGTGT GGATATCGCC CGCCGCACCG TGGCGAAATA TCGGGAAGCG
ATGAATATCG CTTCCTCCGT ACAACGCCGG CGCGAAAAGA AGGCACGCTT TTCAACGCCG
TAA
 
Protein sequence
MALSPKLDIR QSQSLVMTPQ LMQSIKLLQM THIELDQFLD MEIEKNPLLD RIEADSDDLA 
GGEPASGADD PTESADNDDW FQTEGAGAAE NLSATFDNSL ENIFPDDLGS SQEQWKLSAG
EGAFSGNGYD IDQVTAGRLS LSDYVAEQIV LGFSKAADRF IATALADALD ESGYLRIDIV
GLAHNLGIET AEIGRILGVL QGFDPPGLFA RDLRECLAIQ LRLKDRFDPA MEALIANLDL
LARRDFATLQ KICGVDQADL IDMLAEIRAL DPKPGARFEV SVADTIVPDV LVFSARDGGW
AIELNPATMP RLIVNNEYYA EVSGSVKTEE KAFLTDCMQT AGWLVRSLDQ RARTILKVAQ
EIVRQQDGFL RHGVAHLKPL NLRMVADAVG MHESTISRVT ANKFMATPRG VFELRYFFTA
SLASSEGGEA HSSESVRHRI RQMIEAEKPD EVLSDDAIVD ALKKDGVDIA RRTVAKYREA
MNIASSVQRR REKKARFSTP