Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BOV_0153 |
Symbol | rpoN |
ID | 5203403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella ovis ATCC 25840 |
Kingdom | Bacteria |
Replicon accession | NC_009505 |
Strand | + |
Start bp | 175043 |
End bp | 176545 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640577208 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001258191 |
Protein GI | 148559398 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.128135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCCTGT CGCCTAAACT TGATATCCGT CAATCGCAAT CGCTGGTGAT GACACCCCAG CTCATGCAGT CGATCAAGCT GCTACAGATG ACGCATATCG AGCTCGATCA GTTTCTCGAC ATGGAAATTG AAAAAAATCC GCTTCTGGAC AGGATCGAGG CAGACAGTGA TGATCTTGCG GGCGGCGAGC CTGCATCCGG CGCAGACGAC CCCACTGAAA GCGCCGATAA CGATGACTGG TTCCAGACCG AGGGGGCGGG CGCCGCCGAA AACCTTTCCG CCACTTTCGA TAATTCCCTG GAAAACATTT TTCCTGATGA TCTGGGCTCC AGCCAAGAGC AATGGAAACT GTCTGCGGGC GAGGGGGCGT TTTCCGGCAA CGGCTATGAT ATCGATCAGG TAACGGCAGG CCGCCTGTCG CTCAGTGACT ATGTGGCCGA ACAGATCGTG CTTGGCTTCT CGAAGGCGGC CGACCGTTTC ATCGCGACGG CGCTCGCCGA TGCGCTGGAT GAAAGCGGTT ATCTTCGTAT CGATATTGTC GGGCTTGCAC ACAATCTGGG GATCGAGACC GCCGAGATCG GGCGCATTCT GGGTGTGCTG CAAGGCTTTG ATCCACCAGG GCTTTTTGCG CGCGATCTGC GTGAATGCCT TGCAATCCAG TTGCGTCTCA AGGACCGCTT CGATCCGGCG ATGGAAGCCC TGATCGCCAA TCTCGATCTT CTGGCCCGGC GCGATTTTGC AACACTCCAG AAAATCTGCG GCGTCGATCA GGCGGACCTG ATCGACATGC TGGCCGAAAT CCGCGCGCTC GATCCGAAGC CCGGCGCGCG TTTTGAGGTG TCGGTTGCCG ATACGATCGT GCCGGATGTG CTGGTTTTTT CCGCGCGTGA TGGTGGCTGG GCGATCGAGC TCAATCCGGC AACCATGCCC CGCCTCATCG TCAACAATGA ATATTATGCC GAGGTGAGCG GCTCGGTGAA GACAGAGGAA AAGGCATTTC TTACCGATTG CATGCAGACG GCAGGCTGGC TGGTGCGCAG CCTTGATCAG CGTGCGCGCA CCATCTTGAA AGTAGCGCAG GAGATCGTGC GCCAGCAGGA TGGTTTCCTG CGCCATGGCG TGGCGCATCT GAAGCCGCTG AACCTGCGCA TGGTCGCCGA TGCAGTGGGT ATGCACGAAT CGACCATCAG CCGCGTCACC GCCAACAAGT TTATGGCAAC CCCGCGCGGC GTGTTTGAAT TGCGCTACTT CTTTACCGCT TCGCTTGCCT CATCGGAAGG AGGCGAAGCC CATTCCTCCG AAAGCGTGCG CCATCGCATC CGCCAGATGA TCGAGGCGGA AAAGCCCGAT GAAGTTCTCT CCGATGATGC CATCGTGGAT GCGCTGAAAA AGGACGGTGT GGATATCGCC CGCCGCACCG TGGCGAAATA TCGGGAAGCG ATGAATATCG CTTCCTCCGT ACAACGCCGG CGCGAAAAGA AGGCACGCTT TTCAACGCCG TAA
|
Protein sequence | MALSPKLDIR QSQSLVMTPQ LMQSIKLLQM THIELDQFLD MEIEKNPLLD RIEADSDDLA GGEPASGADD PTESADNDDW FQTEGAGAAE NLSATFDNSL ENIFPDDLGS SQEQWKLSAG EGAFSGNGYD IDQVTAGRLS LSDYVAEQIV LGFSKAADRF IATALADALD ESGYLRIDIV GLAHNLGIET AEIGRILGVL QGFDPPGLFA RDLRECLAIQ LRLKDRFDPA MEALIANLDL LARRDFATLQ KICGVDQADL IDMLAEIRAL DPKPGARFEV SVADTIVPDV LVFSARDGGW AIELNPATMP RLIVNNEYYA EVSGSVKTEE KAFLTDCMQT AGWLVRSLDQ RARTILKVAQ EIVRQQDGFL RHGVAHLKPL NLRMVADAVG MHESTISRVT ANKFMATPRG VFELRYFFTA SLASSEGGEA HSSESVRHRI RQMIEAEKPD EVLSDDAIVD ALKKDGVDIA RRTVAKYREA MNIASSVQRR REKKARFSTP
|
| |