Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BOV_0127 |
Symbol | hrpB |
ID | 5201049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brucella ovis ATCC 25840 |
Kingdom | Bacteria |
Replicon accession | NC_009505 |
Strand | + |
Start bp | 146551 |
End bp | 149049 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640577183 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_001258166 |
Protein GI | 148560733 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00299316 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAACCG CCAAAGCGTA CAATGCAAAA GATGGAAAGC CTTTGACGAG CCTGCCCGAT CTTCCCGTGA CACGAATTCT GCCTCAGCTT GATGAGGCAT TGGCGCATCA TGCAAGCGCG GTCCTTGTTG CGCCGCCGGG TGCGGGCAAA ACGACGCTGG TGCCGCTCCA TATGCTGGGT GTGGACTGGC GCGGGGAAGG CGTGATCGTG CTTCTGGAGC CAAGGCGGCT TGCTGCCCGC GCTGCCGCCC GCCGCATGGC GCAGCTTCTG GGTGAAGAGC CGGGTGAAAC GGTCGGCTAC CGGATGCGCC TTGAAAGCAA GGTATCGGCC AAAACCAGAA TTCTTGTCGT CACCGAGGGC GTCTTTGCGC GCATGATCCT GGATGATCCG GACCTGAATG GCGTTGCCGC CGTTCTCTTT GATGAATTTC ATGAACGCAG CCTTGATGCC GATTTCGGTC TGGCGCTGGC GCTCGATGTG CAGGCGGCAC TGCGCGACGA TCTCAAAATC CTCGTCATGT CGGCAACGCT GGATGGTGCG CGCGTGGCCT CGCTTCTCGG CGATGCGCCG GTCATCGAGA GCGAGGGCCG CGCTTATCCC GTCGATATCC GCTATCGCGA CCGCAAGGCG GATGAGCGGA TTGAGGATGC CATGGCGCGG GCAATCCGCG ATGCACTGGT GGATGAAACG GGCAGTATTC TGGCCTTCCT GCCGGGGCAG GGCGAGATAG AACGCACGGC ACGGCTTCTG GAAGAAAGGC TGCCGGCCAA TGTCCTGCTT GCGCCGCTTT ATGGAGCGAT GGAAGGCAGC GCACAGGATG CGGCAATCAG GCCCGCGCCT GCGGGTAGCC GCAAGATCGT GCTGGCGACC TCGATTGCCG AAACGTCCAT CACGATCGAT GGCGTGCGGG TGGTGATTGA CAGCGGGCTT GCCCGCCTGC CCAAATATGA ACCGGCCACC GGCCTCACCC GGCTTGAAAC CGTGCGAACA TCGCGCGCAA GCGCGGATCA GCGCGCGGGC CGTGCCGGGC GAACCGAACC CGGCATTGCC ATTCGCCTGT GGCATCAGGG GCAGACGGCT TCGCTTCCCG CTTTCTCGCC GCCGGAGATT CTGGAGGCTG ACCTGTCCGG CCTCGTGCTC GATGCCGCCG CATGGGGTGT GACCGATCCG GCAACGCTCA ATTTTCTTGA TAAGCCACTG AAACCGGCCC TCGCCGAAGC GAAGGCGCTT TTGCATCGGC TGGGCGCGCT CGACGAGGCT GGCCGCCTGA CGCCGGATGG TGAGGCGATG CGCTCGCTCG CTCTGCCCGC GCGGCTTGCC CATATGGTGA CCGAAGCTGC CAAGCGCGGC GAGGCACAGG CCGCCGCCGA ACTGGCGGTG CTTTTGACCG AGCGCGGGCT TGGCGGCAAG GATATCGACC TTGAGACCCG TCTTTCGCGC TTTCGCGGTG ATCGGTCGGA TCGCGCGCAG CGCGCCAGGG GATTGGCAAA GCGCCTCGCT GCAAATCTGC GCAATCAGGG TGCGCCAGCC GGTTCGACCG TGGGACGCTT GTTGATCGAC GCCTATCCGG ACCGCATTGC AAAGGCGCGC GGGACTACCG GGCAGTTCCT GCTGGCCAAC GGGCGCGGCG GCGAAGTCGA TCCTGCCGTC AGCCTTAGCC GTGCGCCATG GCTGGTCGTG GCCGATATGT CCGGCAAGGC GGGCCGCGCC CGCATCTTGT CGGCGGCGGA AACGTCCGAA GCTGAAATTC GCGCCGCCCT TGGCGGCCGG ATCGAAAGCG GAAAGCAGAT TGTCTACGAC CCGGAAAAGA ATGCATTGCG CGCGCGCGAG GCTGTGCGCA TCGGCGCAAT AGCCCTTTCG GAAAAGCTTC TTGCCGCGCC CTCGGGCGCT GGCGCCGATG AAGGCGTGAT TGCTGCCGTG CGCGAGCATG GGCTTTCCAT CCTGCCCTGG AGCAAGGAGG CCGAAATCCT GCGCCGCCGT CTTGGCTGGC TTTATCGCGG GCTTGGCGAT CCGTGGCCCT CAATGGAAGA CGACACCCTT CTGGAAAGGC TTGAAGACTG GCTTCTGCCC TTTCTGACCG GCGAGGCCCA GCTCGACCGC ATACCGGGGC GTGTGCTGAA AAACGGTTTG ATGAGCCTTG TGCCATTTGA TCTGCAACGC AGCGTCGACC AGCTTGCGCC GACGCATTTC GAGGCGCCCA CCGGCTCGCA TGTTCCCATC CGCTACGATG CCGAAGAACC CGTGATTGCG GTGCGTGTGC AGGAATTGTT CGGCCTTGGC GCGCATCCTT CCATCGCCAA TGGCAAGGTG CCGCTCTTGC TGGAGCTTCT TTCACCCGCA CATCGTCCAA TCCAGATCAC GCGCGATCTT CCGGGCTTCT GGAAAGGCTC GTGGGCCGAT GTGCGCTCTG ATATGCGCGG GCGCTATCCC AAACATGTCT GGCCGGAAGA TCCTGCCAAT GCAATGCCCA CGCGCCGCGC CAAACCGCGC GGAACCTGA
|
Protein sequence | MQTAKAYNAK DGKPLTSLPD LPVTRILPQL DEALAHHASA VLVAPPGAGK TTLVPLHMLG VDWRGEGVIV LLEPRRLAAR AAARRMAQLL GEEPGETVGY RMRLESKVSA KTRILVVTEG VFARMILDDP DLNGVAAVLF DEFHERSLDA DFGLALALDV QAALRDDLKI LVMSATLDGA RVASLLGDAP VIESEGRAYP VDIRYRDRKA DERIEDAMAR AIRDALVDET GSILAFLPGQ GEIERTARLL EERLPANVLL APLYGAMEGS AQDAAIRPAP AGSRKIVLAT SIAETSITID GVRVVIDSGL ARLPKYEPAT GLTRLETVRT SRASADQRAG RAGRTEPGIA IRLWHQGQTA SLPAFSPPEI LEADLSGLVL DAAAWGVTDP ATLNFLDKPL KPALAEAKAL LHRLGALDEA GRLTPDGEAM RSLALPARLA HMVTEAAKRG EAQAAAELAV LLTERGLGGK DIDLETRLSR FRGDRSDRAQ RARGLAKRLA ANLRNQGAPA GSTVGRLLID AYPDRIAKAR GTTGQFLLAN GRGGEVDPAV SLSRAPWLVV ADMSGKAGRA RILSAAETSE AEIRAALGGR IESGKQIVYD PEKNALRARE AVRIGAIALS EKLLAAPSGA GADEGVIAAV REHGLSILPW SKEAEILRRR LGWLYRGLGD PWPSMEDDTL LERLEDWLLP FLTGEAQLDR IPGRVLKNGL MSLVPFDLQR SVDQLAPTHF EAPTGSHVPI RYDAEEPVIA VRVQELFGLG AHPSIANGKV PLLLELLSPA HRPIQITRDL PGFWKGSWAD VRSDMRGRYP KHVWPEDPAN AMPTRRAKPR GT
|
| |