| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BOV_0119 |
|---|
| Symbol | polA |
|---|
| ID | 5202296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella ovis ATCC 25840 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009505 |
|---|
| Strand | + |
|---|
| Start bp | 135254 |
|---|
| End bp | 138190 |
|---|
| Gene Length | 2937 bp |
|---|
| Protein Length | 978 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640577177 |
|---|
| Product | DNA polymerase I |
|---|
| Protein accession | YP_001258160 |
|---|
| Protein GI | 148560597 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
|---|
| TIGRFAM ID | [TIGR00593] DNA polymerase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG GCGATCATCT CTTTCTCGTT GACGGCTCGG GCTATATTTT CCGCGCCTAT
CATGCCCTGC CGCCGCTGAC CCGCAAGACG GATGGCCTGC CTGTCGGTGC GGTTTCCGGT
TTCTGCAACA TGCTGTGGAA GCTGTTGAAG GATGCGCGCA ACACGGATGT CGGCGTGGTG
CCGACCCATT TCGCGGTCAT TTTCGACTAT TCGTCGAAGA CGTTCCGCAA GGAGATTTAT
CCTGATTACA AGGCGAACCG CACCGCGCCC CCTGAAGACC TGATCCCGCA ATTCGGCCTC
ATCCGACAGG CGACCCGCGC CTTCAATCTG CCCTGCATCG AGAAGGAGGG CTTCGAGGCT
GACGACCTTA TCGCCACCTA TGCGCGTCTG GCTGAGAAAG CGGGCGGCGA TGTCACGATC
ATCTCCTCCG ACAAGGACCT CATGCAGCTC GTGACACCAA GCGTGTCGAT GTATGACAGC
ATGAAGGACA AGCAGATTTC GATCCCGGAA GTGATCGAGA AATGGGGCGT GCCGCCGGAA
AAGATGATCG ACCTGCAATC GCTGACCGGC GACAGCACCG ACAATGTTCC GGGCATTCCC
GGCATCGGCC CGAAAACGGC GGCGCAATTG CTGGAAGAGT TTGGCGATCT CGACACGCTT
TTGGCCCGCG CCTCTGAAAT CAAGCAGAAC AAGCGCCGCG AGAACATTCT GGCTTTTGCC
GACCAGACGA AGATCGCGCG CGAATTGGTG ACACTCAAGA CGGATGTGCC GCTCGATATC
GATCTGGACG GGCTGGTGCT GGAGCCGCAG AACGGGCCGA AACTGATCGG CTTCCTGAAG
GCAATGGAAT TCACCTCGCT CACCCGCCGC GTGGCCGAGG CAACCGATAC GGACGCTTCT
TCGGTCGAGC CATGCCATGT GGAGACCGAC TGGGGGGCGG ATGCTCATGG CCCCGATGTC
GATGTTCCCG AAAAGGCCGA TGCTGCTGCA TCGCAACTGC TCTCGGCGCC GACTGCCGCT
GAGCCCGATC AGGGCTATAC GCCGAAAGCG CTCGCAGAAG GGCGGGCGGC GCAAGCCATC
GCGCAAAAGA TCGATACGAG CGCCTATGTC TGCATCCGCG ATATTGCGAC GCTGGAGCAA
TGGCTGGCCG AAGCGGCCGA AACAGGTATC CTTGCTTTTG ACACGGAAAC GACTTCGCTT
GATCCGATGC AGGCCGAACT TGTTGGCTTC TCCCTGGCGC TCGCACCGGG AAAGGCCGCC
TATGTGCCGC TCCAGCACAA GTCTGGCGCG GGCGATCTTC TGGGCGGTGG CATGGTGGAG
AACCAGATCC CGCTTGATAT GGCACTCGCG GCGCTGAAAC GCGTGCTTGA GGACGCTTCC
ATTCTCAAGA TCGCGCAGAA CATGAAATAT GACTGGCTTG TCATGCGCCG CCACGGCATC
AACGCCGTTT CCTTCGACGA TACGATGCTG ATTTCCTATG TTCTGGATGC GGGTACAGGC
AGACACGGCA TGGACCCTTT GTCCGAGCGA TGGCTTGGCC ACACCCCGAT TGCCTATAAG
GACGTGGCGG GAAGCGGCAA GAGCGCCGTC ACTTTCGACA TGGTGGATAT CGACCGTGCG
ACGGCCTATG CCGCCGAAGA TGCCGATGTG ACCTTGCGCC TGTGGCAGGT GCTGAAGCCG
CGCCTTGCAG CGGAGGGGCT GATGTCGGTC TATGAGCGGC TGGAGCGTCC GCTGGTCGAT
GTGCTGGCGC GCATGGAAGA ACGCGGCATT GCCGTTGACC GTCAGGTGCT GTCACGCCTT
TCCGGCGATC TGGCGCAGGC CGCTGCCGCT TATGAAGACG AGATTTACGC GCTTGCGGGC
GAGAAATTCA CCATTGGCTC GCCCAAACAG CTTGGCGATA TCCTCTTCGG CAAGATGGGG
CTGCCCGGCG CATCCAAGAC CAAGACAGGC CAGTGGTCGA CCTCCGCGCA GGTTCTGGAA
GACCTTGCCG CCGAAGGTCA TCCTCTGCCG CGCAAGATCG TGGACTGGCG CCAGCTTACC
AAGCTCAAAT CCACTTATAC GGATGCGCTG CCGGGTTTCA TCAACCCCCA GACCAAGCGC
GTCCATACAT CCTATGCAAT GGCATCCACC TCGACGGGGC GCCTTTCCTC GTCCGACCCC
AATTTGCAGA ATATTCCGGT GCGCACCGCA GAAGGCCGCA AGATCAGGAC AGCCTTCATC
GCCGAACCCG GCAACAAGCT GATTTCCGCC GACTACAGCC AGATCGAACT GCGCGTTCTG
GCACATGTGG CCGATATTGC GCAATTGAAA CAGGCCTTTG CCGACGGCAT CGATATTCAT
GCCATGACGG CGTCGGAAAT GTTCGGTGTT CCGGTGGAAG GCATGCCCTC GGAAGTGCGC
CGCCGCGCCA AGGCGATCAA TTTCGGCATT ATTTACGGCA TTTCCGCTTT CGGTCTGGCG
AACCAGCTTT CCATCCCGCG CGAGGAAGCG GGGCAATATA TCCGCACCTA TTTCGAGCGT
TTTCCCGGCA TCAAGGATTA TATGGAAGCA ACCAAGGCAT TCGCCCGCGA GCATGGCTAT
GTCGAAACCA TTTTCGGGCG GCGTGCACAC TACCCGGATA TCCGCGCATC CAACCCGCAG
GTTCGCGCTT TCAACGAGCG CGCGGCCATC AACGCGCCGA TCCAGGGGGC TGCTGCCGAT
ATCATCCGCC GCGCCATGAT CCGTATGGAA GATGCGCTGG CCAAGGAAAA TCTCGCCGCG
CGTATGCTTT TGCAGGTCCA TGACGAACTG ATCTTTGAAG TGCCTGAAAA TGAGGTTGAA
AAGACTATTC CGGTCGTGCG CCGCGTAATG GAGAATGCGG CTATGCCTGC CGTCTCGCTT
GCGGTGCCGC TGCGTGTGGA TGCAAGGGCG GCGCATAACT GGGACGAGGC GCATTGA
|
|---|
| Protein sequence | MKKGDHLFLV DGSGYIFRAY HALPPLTRKT DGLPVGAVSG FCNMLWKLLK DARNTDVGVV
PTHFAVIFDY SSKTFRKEIY PDYKANRTAP PEDLIPQFGL IRQATRAFNL PCIEKEGFEA
DDLIATYARL AEKAGGDVTI ISSDKDLMQL VTPSVSMYDS MKDKQISIPE VIEKWGVPPE
KMIDLQSLTG DSTDNVPGIP GIGPKTAAQL LEEFGDLDTL LARASEIKQN KRRENILAFA
DQTKIARELV TLKTDVPLDI DLDGLVLEPQ NGPKLIGFLK AMEFTSLTRR VAEATDTDAS
SVEPCHVETD WGADAHGPDV DVPEKADAAA SQLLSAPTAA EPDQGYTPKA LAEGRAAQAI
AQKIDTSAYV CIRDIATLEQ WLAEAAETGI LAFDTETTSL DPMQAELVGF SLALAPGKAA
YVPLQHKSGA GDLLGGGMVE NQIPLDMALA ALKRVLEDAS ILKIAQNMKY DWLVMRRHGI
NAVSFDDTML ISYVLDAGTG RHGMDPLSER WLGHTPIAYK DVAGSGKSAV TFDMVDIDRA
TAYAAEDADV TLRLWQVLKP RLAAEGLMSV YERLERPLVD VLARMEERGI AVDRQVLSRL
SGDLAQAAAA YEDEIYALAG EKFTIGSPKQ LGDILFGKMG LPGASKTKTG QWSTSAQVLE
DLAAEGHPLP RKIVDWRQLT KLKSTYTDAL PGFINPQTKR VHTSYAMAST STGRLSSSDP
NLQNIPVRTA EGRKIRTAFI AEPGNKLISA DYSQIELRVL AHVADIAQLK QAFADGIDIH
AMTASEMFGV PVEGMPSEVR RRAKAINFGI IYGISAFGLA NQLSIPREEA GQYIRTYFER
FPGIKDYMEA TKAFAREHGY VETIFGRRAH YPDIRASNPQ VRAFNERAAI NAPIQGAAAD
IIRRAMIRME DALAKENLAA RMLLQVHDEL IFEVPENEVE KTIPVVRRVM ENAAMPAVSL
AVPLRVDARA AHNWDEAH
|
|---|
| |