| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_2525 |
|---|
| Symbol | |
|---|
| ID | 5168817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | - |
|---|
| Start bp | 2667104 |
|---|
| End bp | 2669989 |
|---|
| Gene Length | 2886 bp |
|---|
| Protein Length | 961 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640566910 |
|---|
| Product | cell wall anchor domain-containing protein |
|---|
| Protein accession | YP_001247878 |
|---|
| Protein GI | 148268935 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5373] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01168] Gram-positive signal peptide, YSIRK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAGCA ATCTTAGATA CGGCATAAGA AAACACAAAT TGGGAGCGGC CTCAGTATTC
TTAGGAACAA TGATCGTTGT TGGAATGGGA CAAGAAAAAG AAGCTGCAGC ATCGGAACAA
AACAATACTA CAGTAGAGGA AAGTGGGAGT TCAGCTACTG AAAGTAAAGC AAGCGAAACA
CAAACAACTA CAAATAACGT TAATACAATA GATGAAACAC AATCATACAG CGCGACATCA
ACTGAGCAAC CATCAAAATC AACTCAAGTA ACAACAGAAG AAGCACCAAC AACTGTGCAA
GCACCAAAAG TAGAAACCGA AATGAAATCA CAAGAAGATT TACCATCAGA AAAAGTTGCT
GATAAGGAAA CTACAGGAAC TCAAGTTGAC ATAGCTCAAC CAAGTAACGT CTCAGAAATT
AAACCAAGAA TGAAAAGATC AGCTGACGTT ACAGCAGTTT CAGAGAAAGA AGTAGCGGAA
GAAGCTAAAG CGACAGGTAC AGATGTAACA AATAAAGTGG AAGTTACTGA AAGCTCTTTA
GAAGGACATA ATAAAGATTC GAATATTGTT AATCCGCATA ATGCTCAAAG AGTAACTTTA
AAATACAAAT GGAAATTTGG AGAAGGAATT AAGGCAGGAG ATTATTTTGA TTTCACATTA
AGTGATAATG TTGAAACACA TGGTATATCA ACACTGCGTA AAGTTCCGGA GATAAAAAGT
TCAACAGAAG ATAAAGTTAT GGCAAATGGT CAAGTTATAA ATGAACGTAC AATTCGCTAT
ACATTTACTG ATTATATAAA TAACAAAAAA GATTTAACTG CTGAATTAAA CTTAAACCTA
TTCATTGACC CAACAACAGT GACAAAGCAA GGGAGTCAAA AAGTTGAAGT AACACTAGGT
CAAAATAAAG TCTCAAAAGA ATTTGATATC AAATATTTAG ACGGCGTTAA AGATAGAATG
GGTGTTACTG TTAATGGTCG TATTGATACT TTGAATAAAG AAGAGGGTAA ATTTAGCCAT
TTTGCATATG TGAAGCCTAA CAACCAGTCG TTAACTTCTG TCACAGTAAC TGGTCAAGTA
ACATCTGGAT ATAAACAAAG TGCTAATAAT CCAACAGTCA AAGTATATAA ACACATTGGT
TCAGATGAAT TAGCTGAAAG TGTTTATGCA AAGCTTGATG ATACCAGTAA ATTTGAAGAT
GTGACTGAAA AAGTAAATCT ATCTTACACA AGTAATGGTG GGTACACATT GAACCTTGGC
GATTTAGATA ATTCGAAAGA CTATGTAATT AAATATGAAG GTGAATATGA TCAAAATGCT
AAGGATCTAA ATTTCCGAAC ACATCTTTCA GGATATCATA AATACTACCC ATACTATCCT
TATTACCCGT ATTATCCAGT TCAATTAACT TGGAACAACG GTGTTGCATT TTACTCTAAT
AATGCTAAAG GCGATGGTAA AGATAAACCA AATGATCCTA TCATTGAGAA GAGTGAACCA
ATTGATTTAG ACATTAAATC AGAGCCACCA GTGGAGAAGC ATGAATTGAC TGGTACAATC
GAAGAAAGTA ACGATTCTAA GCCAATTGAT TTTGAATATC ATACAGCTGT TGAAGGTGCA
GAAGGTCATG CAGAAGGTAT TATTGAAACT GAAGAAGATT CTATTCATGT GGATTTTGAA
GAATCTACAC ATGAAAATTC AAAACATCAC GCTGATGTTG TTGAATATGA AGAGGATACA
AACCCAGGTG GTGGCCAAGT AACAACTGAG TCTAACTTAG TTGAATTTGA CGAAGAGTCT
ACAAAAGGTA TTGTAACTGG CGCAGTGAGC GACCATACAA CAGTTGAAGA TACGAAAGAA
TATACAACTG AAAGTAATCT GATTGAATTA GTGGATGAAT TACCTGAAGA ACATGGTCAA
GCACAAGGGC CAATCGAGGA AATTACTGAA AACAATCATC ATATTTCTCA TTCTGGTTTA
GGAACTGAAA ATGGTCACGG TAATTATGGC GTGATTGATG AAATCGAAGA AAATAGCCAC
GTTGATATTA AGAGTGAATT AGGTTATGAA GGTGGCCAAA ATAGCGGTAA TCAGTCATTC
GAGGAAGACA CAGAAGAAGA TAAACCTAAA TATGAACAAG GTGGTAATAT CGTAGATATC
GATTTCGACA GTGTACCTCA AATTCATGGT CAAAATAATG GTAACCAGTC ATTCGAGGAA
GACACAGAAG AAGACAAGCC TAAGTATGAA CAAGGTGGTA ACATCATTGA TATCGACTTC
GACAGTGTGC CACAAATTCA TGGATTCAAT AAGCATAATG AAATTATTGA AGAAGATACA
AACAAAGATA AACCTAATTA TCAATTTGGT GGACACAACA GTGTTGATTT TGAAGAAGAT
ACACTTCCAA AAGTAAGTGG TCAAAATGAA GGTCAACAAA CGATTGAAGA AGATACAACG
CCGCCAACAC CGCCAACACC AGAGGTACCA AGTGAGCCGG AAACACCAAC ACCACCAACA
CCAGAAGTAC CGAGTGAGCC AGGCGAACCA ACGCCACCAA AACCGGAAGT ACCAAGTGAG
CCGGAAACAC CAGTACCACC AACACCAGAG GTACCATCTG AACCTGGTAA ACCAGTACCA
CCTGCTAAAG AAGAACCTAA AAAACCTTCT AAACCAGTGG AACAAGGTAA GGTAGTAACA
CCTGTTATTG AAATCAATGA AAAGGTTAAA GCAGTGGCAC CAACTAAACA AAAACAATCT
AAGAAATCTG AACTACCTGA AACAGGTGGA GAAGAATCAA CAAACAAAGG TATGTTGTTC
GGCGGATTAT TCAGCATTCT AGGTTTAGTA TTATTACGCA GAAATAAAAA GAATAACAAA
GCATAA
|
|---|
| Protein sequence | MKSNLRYGIR KHKLGAASVF LGTMIVVGMG QEKEAAASEQ NNTTVEESGS SATESKASET
QTTTNNVNTI DETQSYSATS TEQPSKSTQV TTEEAPTTVQ APKVETEMKS QEDLPSEKVA
DKETTGTQVD IAQPSNVSEI KPRMKRSADV TAVSEKEVAE EAKATGTDVT NKVEVTESSL
EGHNKDSNIV NPHNAQRVTL KYKWKFGEGI KAGDYFDFTL SDNVETHGIS TLRKVPEIKS
STEDKVMANG QVINERTIRY TFTDYINNKK DLTAELNLNL FIDPTTVTKQ GSQKVEVTLG
QNKVSKEFDI KYLDGVKDRM GVTVNGRIDT LNKEEGKFSH FAYVKPNNQS LTSVTVTGQV
TSGYKQSANN PTVKVYKHIG SDELAESVYA KLDDTSKFED VTEKVNLSYT SNGGYTLNLG
DLDNSKDYVI KYEGEYDQNA KDLNFRTHLS GYHKYYPYYP YYPYYPVQLT WNNGVAFYSN
NAKGDGKDKP NDPIIEKSEP IDLDIKSEPP VEKHELTGTI EESNDSKPID FEYHTAVEGA
EGHAEGIIET EEDSIHVDFE ESTHENSKHH ADVVEYEEDT NPGGGQVTTE SNLVEFDEES
TKGIVTGAVS DHTTVEDTKE YTTESNLIEL VDELPEEHGQ AQGPIEEITE NNHHISHSGL
GTENGHGNYG VIDEIEENSH VDIKSELGYE GGQNSGNQSF EEDTEEDKPK YEQGGNIVDI
DFDSVPQIHG QNNGNQSFEE DTEEDKPKYE QGGNIIDIDF DSVPQIHGFN KHNEIIEEDT
NKDKPNYQFG GHNSVDFEED TLPKVSGQNE GQQTIEEDTT PPTPPTPEVP SEPETPTPPT
PEVPSEPGEP TPPKPEVPSE PETPVPPTPE VPSEPGKPVP PAKEEPKKPS KPVEQGKVVT
PVIEINEKVK AVAPTKQKQS KKSELPETGG EESTNKGMLF GGLFSILGLV LLRRNKKNNK
A
|
|---|
| |