Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_2376 |
Symbol | |
ID | 5169797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | - |
Start bp | 2507873 |
End bp | 2509804 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640566764 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001247732 |
Protein GI | 148268789 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACGA CCTTCATTAT TAGCTACATT ATTTTAGCGC TCATTATTGT TGGGGTTATC AATTTATTTT TAATAAGATC AAGAAAAAAA GGCAAACGCC AACAAAAGGA ACAACAATTT ACGACACGTC AATCAAATCA ATCTAAATTT AAAGCTAGTG ATTTAGACAA AACAACTGAT CAATCGACAC AACGTATGAC GCATGAAGAG TTGCGTGTTG ACAATCAAGA TGATCATAGC CAAGTTAGTC TAAATGGTTA CACAAAGGGG TCTGAGAAAG ATCAAGAAGC ATTCACTAAT AATAATGGTG AGGAAGCAGT TGCTGCTAAA AATCCTGAAT CAGAAGAATA TAAAGTGAAT GAAAAAATAA AAAAAGAACA TAAAAACTTT ATTTTTGGTG AAGGTGTTTC ACGCGGTAAA ATATTAGCGG CATTATTATT CGGTATGTTT ATTGCGATTT TAAACCAAAC ATTATTAAAT GTTGCTTTGC CAAAAATTAA TACGGAATTT AATATTTCTG CGTCAACAGG GCAATGGTTG ATGACGGGAT TCATGTTAGT AAACGGTATT TTAATACCAA TTACGGCGTA TCTATTTAAT AAATATTCAT ATCGAAAATT ATTTTTAGTT GCGTTAGTAC TCTTTACAAT TGGTTCATTA ATCTGTGCGA TTTCAATGAA TTTCCCAATC ATGATGGTTG GACGTGTATT ACAAGCCATT GGTGCAGGTG TACTAATGCC ATTAGGTTCA ATTGTTATTA TTACAATTTA TCCACCTGAA AAACGTGGTG CTGCCATGGG TACAATGGGT ATCGCAATGA TTTTAGCACC TGCAATTGGT CCAACATTAT CAGGTTATAT TGTACAAAAT TACCATTGGA ATGTGATGTT TTACGGTATG TTCATTATCG GTATTATTGC AATCTTAGTT GGTTTTGTAT GGTTTAAGTT ATATCAATAT ACAACAAACC CTAAAGCTGA TATCCCAGGT ATCATTTTTA GTACGATTGG TTTTGGTGCT TTGTTATACG GCTTTTCAGA AGCGGGGAAC AAAGGATGGG GTTCTGTTGA GATAGAAACA ATGTTTGCGA TTGGTATTAT CTTTATTATT CTATTTGTAA TAAGAGAATT AAGAATGAAA TCACCAATGT TGAATTTAGA AGTATTAAAA TTCCCAACAT TTACATTAAC AACAATTATT AATATGGTTG TAATGTTAAG TTTATATGGT GGTATGATTT TATTACCGAT TTATTTACAA AATTTACGCG GATTCTCAGC ATTAGATTCC GGATTGTTAT TATTACCTGG TTCTCTAATT ATGGGTCTAC TTGGACCATT TGCAGGTAAA TTGTTAGATA CTATTGGTTT AAAACCATTA GCTATCTTTG GTATTGCTGT CATGACTTAT GCAACATGGG AATTAACTAA ATTAAATATG GATACACCAT ATATGACAAT CATGGGTATC TATGTACTTC GTTCATTTGG TATGGCATTT ATAATGATGC CAATGGTAAC TGCAGCTATT AATGCGTTAC CGGGACGACT TGCCTCTCAT GGTAATGCTT TCTTAAATAC GATGCGTCAA TTAGCAGGCT CTATAGGTAC AGCAATCTTA GTTACTGTTA TGACAACACA AACAACACAA CATTTATCAG CTTTTGGGGA AGAGTTAGAT AAAACGAATC CTGTTGTACA AGATCATATG CGTGAATTAG CATCGCAATA TGGTGGTCAA GAAGGCGCAA TGAAAGTGTT ATTACAATTT GTAAATAAAC TAGCAACAGT TGAAGGTATT AATGATGCAT TTATAGTTGC AACGATATTT AGCATCATCG CTTTAATTTT ATGTTTATTT TTACAAAGTA ATAAAAAAGC AAAAGCTACA GCTCAAAAGT TAGAAGCAAG CTCAAATAAC AATCATGAAT AA
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Protein sequence | MTTTFIISYI ILALIIVGVI NLFLIRSRKK GKRQQKEQQF TTRQSNQSKF KASDLDKTTD QSTQRMTHEE LRVDNQDDHS QVSLNGYTKG SEKDQEAFTN NNGEEAVAAK NPESEEYKVN EKIKKEHKNF IFGEGVSRGK ILAALLFGMF IAILNQTLLN VALPKINTEF NISASTGQWL MTGFMLVNGI LIPITAYLFN KYSYRKLFLV ALVLFTIGSL ICAISMNFPI MMVGRVLQAI GAGVLMPLGS IVIITIYPPE KRGAAMGTMG IAMILAPAIG PTLSGYIVQN YHWNVMFYGM FIIGIIAILV GFVWFKLYQY TTNPKADIPG IIFSTIGFGA LLYGFSEAGN KGWGSVEIET MFAIGIIFII LFVIRELRMK SPMLNLEVLK FPTFTLTTII NMVVMLSLYG GMILLPIYLQ NLRGFSALDS GLLLLPGSLI MGLLGPFAGK LLDTIGLKPL AIFGIAVMTY ATWELTKLNM DTPYMTIMGI YVLRSFGMAF IMMPMVTAAI NALPGRLASH GNAFLNTMRQ LAGSIGTAIL VTVMTTQTTQ HLSAFGEELD KTNPVVQDHM RELASQYGGQ EGAMKVLLQF VNKLATVEGI NDAFIVATIF SIIALILCLF LQSNKKAKAT AQKLEASSNN NHE
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