| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_1978 |
|---|
| Symbol | |
|---|
| ID | 5168030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | - |
|---|
| Start bp | 2113838 |
|---|
| End bp | 2114866 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640566355 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001247339 |
|---|
| Protein GI | 148268396 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2706] 3-carboxymuconate cyclase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0536257 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATG GATATATTGG TTCTTACACT AAAAAGAATG GTAAAGGGAT TTATCGTTTT
GAATTAAACG AAAATCAGTC ACGTATTGAT TTATTAGAAA TAGGATTTGA ATTAGAAGCG
TCTACATATT TGGTGCGTAA TAACGAAGTT TTATATGGAA TCAACAAAGA AGGAGAACAA
TGCGGTGTTG CGAGTTTGAA AATTGATGAC AATGGTGAAT TGCATTTATT AAATAAATGT
TTGTCTTCAA AAGCTGGTAC AGGTTGTTAT GTATCGATTT CAGAAGATAA ACGATATTTA
TTTGAAGCGG TATATGGTGC TGGCATCATA CGTATGTATG AATTAAATAC GCACACAGGT
GAAATTATAC GTCTAATTCA AGAACTTGCA CATGATTTTC CAACAGGTAC ACATGAAAGA
CAAGATCATC CACACGCACA TTATATTAAT CAAACTCCAG ATGGTAAGTA CGTTGCAGTA
ACAGATTTAG GTGCTGATCG TATCGTTACT TATAAATTTG ATGACAACGG GTTTGAATTT
TATAAAGAAT CTTTATTTAA AGATAGTGAT GGGACAAGAC ATATTGAATT TCATGATAAT
GGAAAATTTG CTTATGTCGT ACACGAATTA TCAAATACTG TGAGTGTTGC AGAATATAAT
GACGGTAAAT TTGAAGAGCT CGAGCGTCAT TTAACAATTC CTGAAAACTT TGATGGAGAT
ACTAAACTTG CAGCAGTGCG TTTGTCTCAT GATCAACAAT TCTTATATGT ATCTAATAGA
GGGCATGATA GCATTGCAAT TTTTAAAGTT CTTGATAATG GTCAACACTT AGAACTAGTA
ACAATTACTG AAAGTGGTGG TCAATTCCCA AGAGATTTTA ATATTGCCTC ATCAGATGAC
CTTTTAGTTT GTGCTCATGA GCAAGGAGAT TCAGTTGTAA CTGTTTTTGA AAGAAGTAAA
GAAACAGGTA AAATTACTCT ATGTGATAAT ACTCGTGTAG CATCTGAAGG TGTATGTGTC
ATATTTTAA
|
|---|
| Protein sequence | MTNGYIGSYT KKNGKGIYRF ELNENQSRID LLEIGFELEA STYLVRNNEV LYGINKEGEQ
CGVASLKIDD NGELHLLNKC LSSKAGTGCY VSISEDKRYL FEAVYGAGII RMYELNTHTG
EIIRLIQELA HDFPTGTHER QDHPHAHYIN QTPDGKYVAV TDLGADRIVT YKFDDNGFEF
YKESLFKDSD GTRHIEFHDN GKFAYVVHEL SNTVSVAEYN DGKFEELERH LTIPENFDGD
TKLAAVRLSH DQQFLYVSNR GHDSIAIFKV LDNGQHLELV TITESGGQFP RDFNIASSDD
LLVCAHEQGD SVVTVFERSK ETGKITLCDN TRVASEGVCV IF
|
|---|
| |