Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_1823 |
Symbol | |
ID | 5168426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | - |
Start bp | 1950397 |
End bp | 1951440 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640566166 |
Product | riboflavin biosynthesis protein RibD |
Protein accession | YP_001247189 |
Protein GI | 148268246 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.748712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAGTCAAT TTATGGATTA TGCGATTCAA CTTGCAAATA TGGTACAAGG TCAAACAGGT GTTAATCCAC CCGTTGGCGC TGTTGTAGTT AATGAAGGTA GGATTGTTGG TATTGGTGCA CACTTGAGAA AAGGTGACAA GCATGCGGAG GTTCAAGCAC TTGATATGGC ACAACAAAAT GCTGAAGGTG CGACGATTTA TATTACGTTA GAGCCATGTA GTCATTTTGG TTCAACACCA CCCTGTGTTA ACAAAATTAT TGATTGTAAG ATAGCAAAAG TAGTATACGC AACAAAAGAC AATTCGTTAG ACACACATGG TGATGAGACG TTACGGGCTC ACGGTATTGA GGTTGAATGC GTTGATGATG AACGGGCATC ACAATTATAC CAAGACTTTT TTAAAGCAAA AGCAAAGCAA CTGCCACAAA TTACAGTGAA AGTATCTGCA AGTTTAGATG GTAAACAAGC GAATGATAAT GGACAAAGTC AATGGATTAC TAACAAAGAG GTTAAACAAG ATGTCTATAA GTTAAGACAT CGACACGACG CAGTGTTAAC TGGAAGACGT ACAGTTGAAT TAGATGATCC ACAATATACT ACACGTATTC AAGATGGAAA AAACCCTATA AAAGTAATAT TGTCTAAGTC TGGGAATATT CATTTTAATC AGCAAATTTA TCAAGATGAA TCAACACCAA TTTGGATATA TACTGAAAAT CCAAATTTAA CAAGCAATCA AACACATATT GAAATTATTT ACTTGAAGTC TTGTGATTTA ACAACAATTC TTCACAATTT ATATAAAAGA GGAGTTGGAA CTTTGCTAGT CGAGGCAGGT CCAACCACTA CTTCAGAATT TCTCCAATCT AATTATATAG ATGAATTTAT TCTCTATTAT GCCCCGAAAT TAATTGGCGG ATCTGGAAAT TATCAATTTT ATCAAACAAA TGATGTGATT GAGATACCAG ATGCGAACCA ATTTGAAATT GTTCATTCCG AGTTATTAAA TCAAAATGTT AAATTAACTT TACGAAAGAA GTGA
|
Protein sequence | MSQFMDYAIQ LANMVQGQTG VNPPVGAVVV NEGRIVGIGA HLRKGDKHAE VQALDMAQQN AEGATIYITL EPCSHFGSTP PCVNKIIDCK IAKVVYATKD NSLDTHGDET LRAHGIEVEC VDDERASQLY QDFFKAKAKQ LPQITVKVSA SLDGKQANDN GQSQWITNKE VKQDVYKLRH RHDAVLTGRR TVELDDPQYT TRIQDGKNPI KVILSKSGNI HFNQQIYQDE STPIWIYTEN PNLTSNQTHI EIIYLKSCDL TTILHNLYKR GVGTLLVEAG PTTTSEFLQS NYIDEFILYY APKLIGGSGN YQFYQTNDVI EIPDANQFEI VHSELLNQNV KLTLRKK
|
| |