| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_1578 |
|---|
| Symbol | |
|---|
| ID | 5168639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | - |
|---|
| Start bp | 1685150 |
|---|
| End bp | 1686829 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640565924 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_001246947 |
|---|
| Protein GI | 148268004 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACAAA CCTTATCAAT CAAGCAATTT GCTATTATTG AAGAATTAGA AATTCAATTT
TCTGATGGTT TAACTGTTTT AAGTGGTGAA ACGGGTTCAG GTAAGTCAAT TATTATAGAT
GCAATTGGAC AATTAATTGG AATGAGAGCT TCATCTGATT TTGTAAGACA TGGTGAAAAA
AAGGCTGTCA TCGAAGGTAT ATTTGATATT GACGAGAGTA AAGATGCTAT ACATATATTG
AAAAATATGG ATATTGATGT AGATGAAGAT TTTTTATTAG TTAAACGGGA AATTTTTAGC
TCTGGTAAAA GTCTTTGTAA AATTAATAAT CAAACAGTTA CTTTACAAGA TTTACGAAAA
GTTATGCAAG AATTATTAGA TATTCATGGC CAACATGAAA CGCAGTCTTT GTTGAAACAA
AAATACCATT TAACATTATT GGATAATTAC GCAGAATCAC GTTATCAAGA TTTGTTGGAT
AAATATCACC AAACTTTTCA AAATTATAAA GCCAAAAAGC AAGAGTTAGA AGATTTAGAA
TCAGCAGACC AAGCATTGCT GCAGCGTTTA GATTTAATGA AATTCCAATT AGAAGAATTG
TCTGAAGCAC ATCTAAAAGA AGGCGAAATA GAGCAACTTG AAATAGATAT TAAACGCATT
CAAAACTCTG AAAAATTAAG CTTAGCGCTT AATAACGCAC ATATGACATT AACGGATGAA
AATGCTATCA CTGATCGTTT GTATGAACTA AGCAACCATT TGTTAACAAT AAACGATATA
GTTCCAAATA AATATGACAA ATTAAAAGAA GATATTGATC AATTTTATTA CATTTTAGAA
GATGCAAAAC ATGAGTTATA TGATGAAATG GCTAATACAG AATTCGACGA ACAAGTGTTA
AACGAGTATG AATCTCGTAT GAATTTGCTG AATAATTTAA AACGTAAATA TGGAAAAGAT
ATTTCAGAAT TAATCGCATA TCAAGAAAAG CTTAATAATG AAATCAATAA AATTGAAAAC
TATGAACAAA GTACATCGCA GTTACGAGAA GAAATAAATG CATTGTATAA TCAAGTTATA
GAGGTTGGAC AAGCGTTATC AAAGCAGCGT CGTATAGTCG CTAGGGAGTT AAGAGACCAC
ATTGTATCGG AAATTCAAAA CTTACAAATG AAAGACGCAA ATCTTGAGAT TTCATTTAAA
AAATTAGAAG AACCGAATAT TGATGGAATC GAATTTGTAG AATTTTTAAT CAGTCCAAAT
AAAGGGGAAC CATTAAAAAG TTTAAATAAA ATTGCATCAG GTGGAGAACT TTCTAGAATT
ATGTTAGCGT TAAAAAGTAT TTTTGTTAAA TCGAGAGGTC AAACTGCAAT TTTATTCGAT
GAGGTTGACT CAGGTGTATC TGGACAAGCC GCACAAAAAA TGGCAGAGAA AATGCGAGAT
ATAGCAGAAT ATATACAAGT TATTTGTATT TCTCACTTGC CACAAGTTGC ATCGATGAGC
GACCATCATT TATTAATTTC GAAGTCATCA AAAGATGATC GTACAACAAC ACAAGTTCAA
GAGTTAATTG GCGATGATAA AGTAGATGAA ATTGCACGAA TGATTTCAGG TGCAAGTGTT
ACTGATTTAA CTCGAGAAAA TGCAAGAGAA ATGATACAAC ACAATCAAAG ACGTAGATAA
|
|---|
| Protein sequence | MLQTLSIKQF AIIEELEIQF SDGLTVLSGE TGSGKSIIID AIGQLIGMRA SSDFVRHGEK
KAVIEGIFDI DESKDAIHIL KNMDIDVDED FLLVKREIFS SGKSLCKINN QTVTLQDLRK
VMQELLDIHG QHETQSLLKQ KYHLTLLDNY AESRYQDLLD KYHQTFQNYK AKKQELEDLE
SADQALLQRL DLMKFQLEEL SEAHLKEGEI EQLEIDIKRI QNSEKLSLAL NNAHMTLTDE
NAITDRLYEL SNHLLTINDI VPNKYDKLKE DIDQFYYILE DAKHELYDEM ANTEFDEQVL
NEYESRMNLL NNLKRKYGKD ISELIAYQEK LNNEINKIEN YEQSTSQLRE EINALYNQVI
EVGQALSKQR RIVARELRDH IVSEIQNLQM KDANLEISFK KLEEPNIDGI EFVEFLISPN
KGEPLKSLNK IASGGELSRI MLALKSIFVK SRGQTAILFD EVDSGVSGQA AQKMAEKMRD
IAEYIQVICI SHLPQVASMS DHHLLISKSS KDDRTTTQVQ ELIGDDKVDE IARMISGASV
TDLTRENARE MIQHNQRRR
|
|---|
| |