Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_1537 |
Symbol | |
ID | 5168409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | - |
Start bp | 1643574 |
End bp | 1645034 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640565884 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_001246907 |
Protein GI | 148267964 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAATA ATTTTAAAGA TGACTTTGAA AAAAATCGTC AATCGATAGA CACAAATTCA CATCAAGACC ATACGGAAGA TGTTGAAAAA GACCAATCAG AATTAGAACA TCAGGATACA ATAGAGAATA CGGAGCAACA GTTTCCGCCA AGAAATGCCC AAAGAAGAAA AAGACGCCGT GATTTAGCAA CGAATCATAA TAAACAAGTT CACAATGAAT CACAAACATC TGAAGACAAT GTTCAAAATG AGGCTGGCAC AATAGATGAT CGTCAAGTCG AATCATCACA CAGTACTGAA AGTCAAGAAC CTAGCCATCA AGACAGTACA CCTCAACATG AAGAGGAATA TTATAATAAG AATGCTTTTG CAATGGATAA ATCACATCCA GAACCAATCG AAGACAATGA TAAACACGAG ACTATTAAAG ATGCAGAAAA TAACACTGAG CATTCAACAG TTTCTGATAA GAGTAAAGCT GAACAATCTC AGCAACCTAA ACCATATTTT GCAACAGGTG CTAACCAAGC AAATACATCA AAAGATAAAC ATGATGATGT AACTGTTAAG CAAGACAAAG ATGAATCTAA AGATCATCAT AGTGGTAAAA AAGGCGCAGC AATTGGTGCT GGAACAGCGG GTGTTGCAGG TGCAGCTGGT GCAATGGGTG TTTCTAAAGC TAAGAAACAT TCAAATGACG CTCAAAACAA AAGTAATTCT GACAAGTCGA ATAACTCGAC TGAGGATAAA GCGTCTCAAG ATAAGTCTAA AGATCATCAT AATGGCAAAA AAGGTGCAGC GATCGGTGCT GGAACAGCAG GTTTGGCTGG AGGCGCAGCA AGTAAAAGTG CTTCTGCCGC TTCAAAACCA CATGCCTCTA ATAATGCAAG CCAAAACCAT GATGAACATG ACAATCATGA CAGAGATAAA GAACGTAAAA AAGGTGGCAT GGCCAAAGTA TTGTTACCAT TAATTGCAGC TGTACTAATT ATCGGTGCAT TAGCGATATT TGGAGGCATG GCATTAAACA ATCATAATAA TGGTACAAAA GAAAATAAAA TCGCGAATAC AAATAAAAAT AATGCTGATG AAAGTAAAGA CAAAGACACA TCTAAAGACG CTTCTAAAGA TAAATCAAAA TCTACAGACA GTGATAAATC AAAAGAGGAT CAAGACAAAG CGACTAAAGA TGAATCTGAT AATGATCAAA ACAACGCTAA TCAAGCGAAC AATCAAGCAC AAAATAATCA AAATCAACAA CAAGCTAATC AAAATCAACA ACAGCAACAA CAACGTCAAG GTGGTGGCCA AAGACATACA GTGAATGGTC AAGAAAACTT ATACCGTATC GCAATTCAAT ACTACGGTTC AGGTTCACCG GAAAATGTTG AAAAAATTAG ACGTGCCAAT GGTTTAAGTG GTAACAATAT TAGAAACGGT CAACAAATCG TTATTCCATA A
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Protein sequence | MSNNFKDDFE KNRQSIDTNS HQDHTEDVEK DQSELEHQDT IENTEQQFPP RNAQRRKRRR DLATNHNKQV HNESQTSEDN VQNEAGTIDD RQVESSHSTE SQEPSHQDST PQHEEEYYNK NAFAMDKSHP EPIEDNDKHE TIKDAENNTE HSTVSDKSKA EQSQQPKPYF ATGANQANTS KDKHDDVTVK QDKDESKDHH SGKKGAAIGA GTAGVAGAAG AMGVSKAKKH SNDAQNKSNS DKSNNSTEDK ASQDKSKDHH NGKKGAAIGA GTAGLAGGAA SKSASAASKP HASNNASQNH DEHDNHDRDK ERKKGGMAKV LLPLIAAVLI IGALAIFGGM ALNNHNNGTK ENKIANTNKN NADESKDKDT SKDASKDKSK STDSDKSKED QDKATKDESD NDQNNANQAN NQAQNNQNQQ QANQNQQQQQ QRQGGGQRHT VNGQENLYRI AIQYYGSGSP ENVEKIRRAN GLSGNNIRNG QQIVIP
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