Gene SaurJH9_1298 details

Gene Information

• Locus tag: SaurJH9_1298
• Symbol: rimM
• ID: 5167225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus aureus subsp. aureus JH9
• Kingdom: Bacteria
• Replicon accession: NC_009487
• Strand: +
• Start bp: 1349149
• End bp: 1349652
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640565649
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_001246673
• Protein GI: 148267730
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000105261
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGTTG AAGTTGGTCA AATTGTTAAC ACACATGGTA TTAAAGGTGA AATTAAAGTA 
AAATCCAATT CAGACTTTAC AGACGTTCGT TTTCAACCCG GTCAAGTGCT GACAGTTGTG 
CATAACAATA ACGACCTTGA ATATACTGTT AAGTCACATA GAGTGCATAA AGGGCTTCAT 
ATGCTTACAT TTGAAGGTAT TAATAATATT AATGATATTG AGCATTTAAA AGGGAGTTCT 
ATTTATCAAG AGCGTGATCA TGAAGATATC GTACTTGAGG AAAATGAATT TTATTATTCA 
GATATTATAG GATGTACAGT TTTTGATGAT CAAGAAACAC CAATAGGTCG TGTAATTAAT 
ATATTTGAAA CAGGTGCGAA TGATGTGTGG GTGATTAAAG GATCTAAAGA ATATTTGATT 
CCTTATATTG CTGATGTTGT AAAAGAAGTG GATGTTGAAA ATAAAAAAAT TATCATCACG 
CCAATGGAAG GATTGTTGGA TTAA 

 

Protein sequence

MRVEVGQIVN THGIKGEIKV KSNSDFTDVR FQPGQVLTVV HNNNDLEYTV KSHRVHKGLH 
MLTFEGINNI NDIEHLKGSS IYQERDHEDI VLEENEFYYS DIIGCTVFDD QETPIGRVIN 
IFETGANDVW VIKGSKEYLI PYIADVVKEV DVENKKIIIT PMEGLLD