Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_1292 |
Symbol | rnc |
ID | 5168837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | + |
Start bp | 1340845 |
End bp | 1341576 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640565643 |
Product | ribonuclease III |
Protein accession | YP_001246667 |
Protein GI | 148267724 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAC AAAAGAAAAG TGAGATAGTT AATCGTTTTA GAAAGCGCTT TGATACTAAA ATGACAGAGT TAGGCTTTAC TTATCAAAAT ATTGATTTAT ACCAACAAGC ATTTTCGCAT TCGAGTTTTA TTAATGATTT TAATATGAAT CGTTTAGACC ATAATGAGCG TTTAGAGTTT TTGGGTGATG CGGTATTAGA ATTGACGGTT TCACGATATT TATTTGATAA ACATCCCAAC TTGCCAGAAG GGAATTTAAC AAAAATGCGT GCCACTATTG TATGTGAGCC CTCACTTGTA ATATTTGCGA ATAAAATTGG ATTGAACGAA ATGATTTTAC TTGGTAAAGG TGAAGAGAAA ACAGGGGGAC GTACAAGACC ATCATTAATA TCAGATGCAT TCGAAGCATT TATTGGGGCA TTGTATTTGG ATCAAGGACT AGATATAGTT TGGAAATTTG CTGAGAAAGT TATTTTCCCA CATGTAGAAC AAAATGAGTT ATTAGGCGTG GTAGATTTTA AAACACAATT CCAAGAATAT GTGCACCAGC AAAATAAAGG TGATGTAACC TATAATTTAA TAAAAGAAGA GGGACCGGCA CATCATCGTC TATTCACTTC AGAAGTTATT CTGCAAGGGG AAGCAATAGC TGAAGGTAAA GGGAAAACGA AAAAAGAATC AGAACAACGT GCTGCTGAAA GTGCCTATAA GCAATTAAAA CAAATTAAAT AG
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Protein sequence | MSKQKKSEIV NRFRKRFDTK MTELGFTYQN IDLYQQAFSH SSFINDFNMN RLDHNERLEF LGDAVLELTV SRYLFDKHPN LPEGNLTKMR ATIVCEPSLV IFANKIGLNE MILLGKGEEK TGGRTRPSLI SDAFEAFIGA LYLDQGLDIV WKFAEKVIFP HVEQNELLGV VDFKTQFQEY VHQQNKGDVT YNLIKEEGPA HHRLFTSEVI LQGEAIAEGK GKTKKESEQR AAESAYKQLK QIK
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