Gene SaurJH9_1161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH9_1161 
Symbol 
ID5169027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH9 
KingdomBacteria 
Replicon accessionNC_009487 
Strand
Start bp1203335 
End bp1204144 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content30% 
IMG OID640565512 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001246537 
Protein GI148267594 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.135086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGT ATGGAAAGCT GTATATCGGG ATACTTTTAG CGATTTTATA CATCCCAATA 
TTCTTTTTAA TGTTCTATTC ATTCAATTCG GCTGGTAATA TGATTCACTT TGAACATTTT
ACATTAGAGC ATTATCAATC ATTATTTCAA AATGATCATT TAATGTCGGT CATTTTTAAT
ACGATAGCTG TAGCACTTTT AGCAGCCTCA ATTTCTACAG TTATTGGTAC ATTTGGTGCC
ATTGCTATTT ATTATTTAAG AAATAAAAAG TTTAAAGTAA CTTTACTAAC ATTGAATAAT
GTCTTGATGG TATCATCCGA CGTTGTCATA GGTGCATCAT TCTTAATTAT GTTTACAACG
ATTGGCCATT TTACTGGTCT TGGTTTAGGA TTTTGGACAG TTCTAATATC TCATATTGCA
TTTTGCATAC CTATAGTTGT GATTATCGTC TTACCACAAC TGTATGAAAT GAATAATAAT
ATGTTAAATG CTGCAAGAGA TTTAGGAGCG ACTGAACCAC AATTATTAAG CAACATTATT
ATTCCTAATA TTTTACCTTC TATTATAGGA GGTTTCTTTA TGGCTTTAAC TTATTCACTA
GACGATTTCA CAGTAAGTTT CTTCGTTACT GGTAATGGCT TTAGTGTGTT ATCAGTTGAA
GTTTATGCTA TGGCGAGAAA AGGAATTAGT ATGGAAATTA ATGCGATTTC AACATTATTG
TTTGCTGTTA TTGTATTAGG AATACTAGGA TATTATTTGA TTCAATACGT GATAAATAAG
AAAAAACTAA TCAAGCGAGG TGTAAAATAA
 
Protein sequence
MKWYGKLYIG ILLAILYIPI FFLMFYSFNS AGNMIHFEHF TLEHYQSLFQ NDHLMSVIFN 
TIAVALLAAS ISTVIGTFGA IAIYYLRNKK FKVTLLTLNN VLMVSSDVVI GASFLIMFTT
IGHFTGLGLG FWTVLISHIA FCIPIVVIIV LPQLYEMNNN MLNAARDLGA TEPQLLSNII
IPNILPSIIG GFFMALTYSL DDFTVSFFVT GNGFSVLSVE VYAMARKGIS MEINAISTLL
FAVIVLGILG YYLIQYVINK KKLIKRGVK